(25 nodes) MreB/Mbl protein network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4DTJ7_BRARP	Uncharacterized protein. (761 aa)
	M4CE30_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (531 aa)
	M4CP89_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (681 aa)
	M4E2V9_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (642 aa)
	M4E219_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (669 aa)
	M4DJG6_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (650 aa)
	M4DEX5_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (666 aa)
	M4DDZ4_BRARP	Uncharacterized protein. (814 aa)
	M4DBC8_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (534 aa)
	M4DBC6_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (711 aa)
	M4D986_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (546 aa)
	M4CZD6_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (602 aa)
	M4CZD7_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (553 aa)
	M4FF07_BRARP	Uncharacterized protein. (818 aa)
	M4D1Z8_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (717 aa)
	M4D2C0_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (676 aa)
	M4D5N7_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (682 aa)
	M4FCB6_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (650 aa)
	M4F4A9_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (572 aa)
	M4F320_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (596 aa)
	M4ES79_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (673 aa)
	M4EIL3_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (680 aa)
	M4EIA6_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (665 aa)
	M4EBC5_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (647 aa)
	M4E7E4_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (584 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CE30_BRARP	M4CZD6_BRARP	M4CE30	M4CZD6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.413
M4CE30_BRARP	M4CZD7_BRARP	M4CE30	M4CZD7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.423
M4CE30_BRARP	M4D986_BRARP	M4CE30	M4D986	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.412
M4CE30_BRARP	M4DDZ4_BRARP	M4CE30	M4DDZ4	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.696
M4CE30_BRARP	M4DEX5_BRARP	M4CE30	M4DEX5	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.566
M4CE30_BRARP	M4DJG6_BRARP	M4CE30	M4DJG6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.408
M4CE30_BRARP	M4DTJ7_BRARP	M4CE30	M4DTJ7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.696
M4CE30_BRARP	M4E219_BRARP	M4CE30	M4E219	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.566
M4CE30_BRARP	M4E2V9_BRARP	M4CE30	M4E2V9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.569
M4CE30_BRARP	M4E7E4_BRARP	M4CE30	M4E7E4	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.408
M4CE30_BRARP	M4EBC5_BRARP	M4CE30	M4EBC5	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.408
M4CE30_BRARP	M4EIA6_BRARP	M4CE30	M4EIA6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.566
M4CE30_BRARP	M4ES79_BRARP	M4CE30	M4ES79	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.566
M4CE30_BRARP	M4F320_BRARP	M4CE30	M4F320	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.409
M4CE30_BRARP	M4F4A9_BRARP	M4CE30	M4F4A9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.424
M4CE30_BRARP	M4FCB6_BRARP	M4CE30	M4FCB6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.407
M4CE30_BRARP	M4FF07_BRARP	M4CE30	M4FF07	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.696
M4CP89_BRARP	M4CZD6_BRARP	M4CP89	M4CZD6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.408
M4CP89_BRARP	M4CZD7_BRARP	M4CP89	M4CZD7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.421
M4CP89_BRARP	M4D986_BRARP	M4CP89	M4D986	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.410

page 1 of 24

Server load: medium (42%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About