STRINGSTRING
M4C831_BRARP M4C831_BRARP M4C8V6_BRARP M4C8V6_BRARP M4C9D0_BRARP M4C9D0_BRARP M4C9X0_BRARP M4C9X0_BRARP M4CAH4_BRARP M4CAH4_BRARP M4CAK3_BRARP M4CAK3_BRARP M4CB94_BRARP M4CB94_BRARP M4CE56_BRARP M4CE56_BRARP M4CE86_BRARP M4CE86_BRARP M4CGD7_BRARP M4CGD7_BRARP M4CGS4_BRARP M4CGS4_BRARP M4CHA1_BRARP M4CHA1_BRARP M4CIV6_BRARP M4CIV6_BRARP M4CK20_BRARP M4CK20_BRARP M4CKL6_BRARP M4CKL6_BRARP M4CKX0_BRARP M4CKX0_BRARP M4CNU3_BRARP M4CNU3_BRARP M4CP37_BRARP M4CP37_BRARP EIF6 EIF6 M4CQ31_BRARP M4CQ31_BRARP M4CQ93_BRARP M4CQ93_BRARP M4CQF4_BRARP M4CQF4_BRARP M4CQP1_BRARP M4CQP1_BRARP M4CQQ3_BRARP M4CQQ3_BRARP M4CR24_BRARP M4CR24_BRARP EIF6-2 EIF6-2 M4CSV0_BRARP M4CSV0_BRARP M4CT25_BRARP M4CT25_BRARP M4CTH7_BRARP M4CTH7_BRARP M4CVG5_BRARP M4CVG5_BRARP M4CWI3_BRARP M4CWI3_BRARP M4CWK1_BRARP M4CWK1_BRARP M4CX36_BRARP M4CX36_BRARP M4CXN2_BRARP M4CXN2_BRARP M4CYN0_BRARP M4CYN0_BRARP M4D062_BRARP M4D062_BRARP M4D0I0_BRARP M4D0I0_BRARP M4D1N2_BRARP M4D1N2_BRARP M4D264_BRARP M4D264_BRARP M4D381_BRARP M4D381_BRARP M4D842_BRARP M4D842_BRARP M4D8Q0_BRARP M4D8Q0_BRARP M4DAV6_BRARP M4DAV6_BRARP M4DBP5_BRARP M4DBP5_BRARP M4DC80_BRARP M4DC80_BRARP M4DG99_BRARP M4DG99_BRARP M4DGI0_BRARP M4DGI0_BRARP M4DH51_BRARP M4DH51_BRARP M4DJH9_BRARP M4DJH9_BRARP M4DJI1_BRARP M4DJI1_BRARP M4DPJ6_BRARP M4DPJ6_BRARP M4DPP6_BRARP M4DPP6_BRARP M4DPW3_BRARP M4DPW3_BRARP M4DR60_BRARP M4DR60_BRARP M4DRK5_BRARP M4DRK5_BRARP M4DTV4_BRARP M4DTV4_BRARP M4DUS9_BRARP M4DUS9_BRARP M4DVG9_BRARP M4DVG9_BRARP M4DXX6_BRARP M4DXX6_BRARP M4E004_BRARP M4E004_BRARP M4E1E7_BRARP M4E1E7_BRARP M4E233_BRARP M4E233_BRARP M4E3G4_BRARP M4E3G4_BRARP M4E3U4_BRARP M4E3U4_BRARP M4E433_BRARP M4E433_BRARP M4E479_BRARP M4E479_BRARP M4E490_BRARP M4E490_BRARP M4E4G3_BRARP M4E4G3_BRARP M4E9K7_BRARP M4E9K7_BRARP M4E9Q7_BRARP M4E9Q7_BRARP M4E9Q9_BRARP M4E9Q9_BRARP M4EBH0_BRARP M4EBH0_BRARP M4EBH2_BRARP M4EBH2_BRARP M4EG75_BRARP M4EG75_BRARP M4EHD8_BRARP M4EHD8_BRARP M4EI75_BRARP M4EI75_BRARP M4EIQ4_BRARP M4EIQ4_BRARP M4ELB7_BRARP M4ELB7_BRARP M4ELE9_BRARP M4ELE9_BRARP M4EMH5_BRARP M4EMH5_BRARP M4EP65_BRARP M4EP65_BRARP M4EPK3_BRARP M4EPK3_BRARP M4EPU5_BRARP M4EPU5_BRARP M4EQQ2_BRARP M4EQQ2_BRARP M4EQW7_BRARP M4EQW7_BRARP M4ERV8_BRARP M4ERV8_BRARP M4ET86_BRARP M4ET86_BRARP M4ETC1_BRARP M4ETC1_BRARP M4ETQ0_BRARP M4ETQ0_BRARP M4ETR1_BRARP M4ETR1_BRARP M4EVC9_BRARP M4EVC9_BRARP M4EVJ8_BRARP M4EVJ8_BRARP M4EWB0_BRARP M4EWB0_BRARP M4EWG5_BRARP M4EWG5_BRARP M4EXU9_BRARP M4EXU9_BRARP M4EYK3_BRARP M4EYK3_BRARP M4EYX8_BRARP M4EYX8_BRARP M4EZT8_BRARP M4EZT8_BRARP M4F0X9_BRARP M4F0X9_BRARP M4F130_BRARP M4F130_BRARP M4F257_BRARP M4F257_BRARP M4F3B2_BRARP M4F3B2_BRARP M4F4P4_BRARP M4F4P4_BRARP M4F4Q5_BRARP M4F4Q5_BRARP M4F4V7_BRARP M4F4V7_BRARP M4F580_BRARP M4F580_BRARP M4F5B5_BRARP M4F5B5_BRARP M4F5S1_BRARP M4F5S1_BRARP M4F5W9_BRARP M4F5W9_BRARP M4F6W3_BRARP M4F6W3_BRARP M4F772_BRARP M4F772_BRARP M4F7V5_BRARP M4F7V5_BRARP M4FCL0_BRARP M4FCL0_BRARP M4FCS1_BRARP M4FCS1_BRARP M4FDW4_BRARP M4FDW4_BRARP M4FEM1_BRARP M4FEM1_BRARP M4FFR8_BRARP M4FFR8_BRARP M4FG09_BRARP M4FG09_BRARP M4FGE3_BRARP M4FGE3_BRARP M4FGX9_BRARP M4FGX9_BRARP M4FI56_BRARP M4FI56_BRARP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
M4C831_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (275 aa)
M4C8V6_BRARPWD_REPEATS_REGION domain-containing protein. (801 aa)
M4C9D0_BRARPWD_REPEATS_REGION domain-containing protein. (889 aa)
M4C9X0_BRARPUncharacterized protein. (833 aa)
M4CAH4_BRARPBP28CT domain-containing protein. (2402 aa)
M4CAK3_BRARPCP-type G domain-containing protein. (584 aa)
M4CB94_BRARPNop domain-containing protein. (505 aa)
M4CE56_BRARPAdenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity; Belongs to the adenylate kinase family. AK6 subfamily. (178 aa)
M4CE86_BRARPUncharacterized protein. (627 aa)
M4CGD7_BRARPPUA domain-containing protein. (547 aa)
M4CGS4_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (267 aa)
M4CHA1_BRARPUncharacterized protein. (482 aa)
M4CIV6_BRARP60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (517 aa)
M4CK20_BRARPPINc domain-containing protein. (196 aa)
M4CKL6_BRARPRibonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (299 aa)
M4CKX0_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (262 aa)
M4CNU3_BRARPWD_REPEATS_REGION domain-containing protein. (533 aa)
M4CP37_BRARPRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (394 aa)
M4CQ31_BRARPS4 RNA-binding domain-containing protein. (182 aa)
M4CQ93_BRARPImportin N-terminal domain-containing protein. (1082 aa)
M4CQF4_BRARPH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (199 aa)
M4CQP1_BRARPGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (221 aa)
M4CQQ3_BRARPRibosomal_L7Ae domain-containing protein. (102 aa)
M4CR24_BRARPAdenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity; Belongs to the adenylate kinase family. AK6 subfamily. (177 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
M4CSV0_BRARPUncharacterized protein. (295 aa)
M4CT25_BRARPRNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1021 aa)
M4CTH7_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (263 aa)
M4CVG5_BRARP5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1049 aa)
M4CWI3_BRARPImportin N-terminal domain-containing protein. (1125 aa)
M4CWK1_BRARPWD_REPEATS_REGION domain-containing protein. (868 aa)
M4CX36_BRARPWD_REPEATS_REGION domain-containing protein. (525 aa)
M4CXN2_BRARPWD_REPEATS_REGION domain-containing protein. (616 aa)
M4CYN0_BRARPRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (156 aa)
M4D062_BRARPExonuclease domain-containing protein. (569 aa)
M4D0I0_BRARPNop domain-containing protein. (537 aa)
M4D1N2_BRARPUncharacterized protein. (646 aa)
M4D264_BRARPUncharacterized protein. (1048 aa)
M4D381_BRARPUncharacterized protein. (792 aa)
M4D842_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (326 aa)
M4D8Q0_BRARPRIO domain-containing protein. (319 aa)
M4DAV6_BRARPRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
M4DBP5_BRARPUncharacterized protein. (310 aa)
M4DC80_BRARPUncharacterized protein. (377 aa)
M4DG99_BRARPBms1-type G domain-containing protein. (1160 aa)
M4DGI0_BRARPUncharacterized protein. (377 aa)
M4DH51_BRARP5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1015 aa)
M4DJH9_BRARPWD_REPEATS_REGION domain-containing protein. (882 aa)
M4DJI1_BRARPUtp12 domain-containing protein. (268 aa)
M4DPJ6_BRARPRNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1024 aa)
M4DPP6_BRARPRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
M4DPW3_BRARPUncharacterized protein. (840 aa)
M4DR60_BRARPNuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (582 aa)
M4DRK5_BRARPUncharacterized protein. (307 aa)
M4DTV4_BRARPNOGCT domain-containing protein. (338 aa)
M4DUS9_BRARPUncharacterized protein. (749 aa)
M4DVG9_BRARPCRC domain-containing protein. (990 aa)
M4DXX6_BRARPImportin N-terminal domain-containing protein. (1078 aa)
M4E004_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (277 aa)
M4E1E7_BRARPUncharacterized protein. (291 aa)
M4E233_BRARPUncharacterized protein. (743 aa)
M4E3G4_BRARPWD_REPEATS_REGION domain-containing protein. (622 aa)
M4E3U4_BRARPWD_REPEATS_REGION domain-containing protein. (466 aa)
M4E433_BRARPS4 RNA-binding domain-containing protein. (182 aa)
M4E479_BRARPWD_REPEATS_REGION domain-containing protein. (868 aa)
M4E490_BRARPImportin N-terminal domain-containing protein. (1088 aa)
M4E4G3_BRARPH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (199 aa)
M4E9K7_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (280 aa)
M4E9Q7_BRARPUncharacterized protein; Belongs to the NOB1 family. (573 aa)
M4E9Q9_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (269 aa)
M4EBH0_BRARPWD_REPEATS_REGION domain-containing protein. (1569 aa)
M4EBH2_BRARPUtp12 domain-containing protein. (279 aa)
M4EG75_BRARPBrix domain-containing protein. (294 aa)
M4EHD8_BRARPRRP7 domain-containing protein. (293 aa)
M4EI75_BRARPUncharacterized protein; Belongs to the NOB1 family. (576 aa)
M4EIQ4_BRARPRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
M4ELB7_BRARPBP28CT domain-containing protein. (2208 aa)
M4ELE9_BRARPCP-type G domain-containing protein. (594 aa)
M4EMH5_BRARPExonuclease domain-containing protein. (361 aa)
M4EP65_BRARPNucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (667 aa)
M4EPK3_BRARPCP-type G domain-containing protein. (576 aa)
M4EPU5_BRARPNop domain-containing protein. (519 aa)
M4EQQ2_BRARPUncharacterized protein. (64 aa)
M4EQW7_BRARPUncharacterized protein. (972 aa)
M4ERV8_BRARPUncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1667 aa)
M4ET86_BRARPImportin N-terminal domain-containing protein. (1037 aa)
M4ETC1_BRARPSerine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (539 aa)
M4ETQ0_BRARPProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (401 aa)
M4ETR1_BRARPU1-type domain-containing protein. (365 aa)
M4EVC9_BRARPUncharacterized protein. (807 aa)
M4EVJ8_BRARPWD_REPEATS_REGION domain-containing protein. (800 aa)
M4EWB0_BRARPNop domain-containing protein. (445 aa)
M4EWG5_BRARPPUA domain-containing protein. (547 aa)
M4EXU9_BRARP5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1023 aa)
M4EYK3_BRARPEFG_C domain-containing protein. (481 aa)
M4EYX8_BRARPMidasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5408 aa)
M4EZT8_BRARPCP-type G domain-containing protein. (530 aa)
M4F0X9_BRARPNOSIC domain-containing protein. (225 aa)
M4F130_BRARPUncharacterized protein. (447 aa)
M4F257_BRARPUncharacterized protein. (455 aa)
M4F3B2_BRARPGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (221 aa)
M4F4P4_BRARPProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (389 aa)
M4F4Q5_BRARPExonuclease domain-containing protein. (412 aa)
M4F4V7_BRARPNop domain-containing protein. (536 aa)
M4F580_BRARPExonuclease domain-containing protein. (226 aa)
M4F5B5_BRARPUncharacterized protein. (783 aa)
M4F5S1_BRARPH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (203 aa)
M4F5W9_BRARPUncharacterized protein. (64 aa)
M4F6W3_BRARPRIO domain-containing protein. (452 aa)
M4F772_BRARPUncharacterized protein. (357 aa)
M4F7V5_BRARPU3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (526 aa)
M4FCL0_BRARPWD_REPEATS_REGION domain-containing protein. (952 aa)
M4FCS1_BRARPRIO domain-containing protein. (456 aa)
M4FDW4_BRARPPINc domain-containing protein. (196 aa)
M4FEM1_BRARPWD_REPEATS_REGION domain-containing protein. (944 aa)
M4FFR8_BRARPProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (420 aa)
M4FG09_BRARP60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (509 aa)
M4FGE3_BRARPCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (281 aa)
M4FGX9_BRARPCP-type G domain-containing protein. (615 aa)
M4FI56_BRARPNop domain-containing protein. (521 aa)
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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