STRINGSTRING
H2YJS5_CIOSA H2YJS5_CIOSA H2ZQ59_CIOSA H2ZQ59_CIOSA H2ZQ34_CIOSA H2ZQ34_CIOSA H2YY65_CIOSA H2YY65_CIOSA H2YZS6_CIOSA H2YZS6_CIOSA H2Z072_CIOSA H2Z072_CIOSA H2Z0D6_CIOSA H2Z0D6_CIOSA H2Z0F6_CIOSA H2Z0F6_CIOSA H2Z0H6_CIOSA H2Z0H6_CIOSA H2Z0S1_CIOSA H2Z0S1_CIOSA H2Z0Y6_CIOSA H2Z0Y6_CIOSA H2Z130_CIOSA H2Z130_CIOSA H2Z1B4_CIOSA H2Z1B4_CIOSA H2Z203_CIOSA H2Z203_CIOSA H2Z2N1_CIOSA H2Z2N1_CIOSA H2Z2Q9_CIOSA H2Z2Q9_CIOSA H2Z3R5_CIOSA H2Z3R5_CIOSA H2Z3R6_CIOSA H2Z3R6_CIOSA H2Z4C6_CIOSA H2Z4C6_CIOSA H2Z4D7_CIOSA H2Z4D7_CIOSA H2Z4H2_CIOSA H2Z4H2_CIOSA H2Z4R2_CIOSA H2Z4R2_CIOSA H2Z4X4_CIOSA H2Z4X4_CIOSA H2Z6S1_CIOSA H2Z6S1_CIOSA H2Z6U7_CIOSA H2Z6U7_CIOSA H2Z6U9_CIOSA H2Z6U9_CIOSA H2Z7K9_CIOSA H2Z7K9_CIOSA H2Z7U1_CIOSA H2Z7U1_CIOSA H2Z7V4_CIOSA H2Z7V4_CIOSA H2Z902_CIOSA H2Z902_CIOSA H2Z976_CIOSA H2Z976_CIOSA H2Z9M2_CIOSA H2Z9M2_CIOSA H2Z9U4_CIOSA H2Z9U4_CIOSA H2Z9X8_CIOSA H2Z9X8_CIOSA H2ZAV4_CIOSA H2ZAV4_CIOSA H2ZB16_CIOSA H2ZB16_CIOSA H2ZB22_CIOSA H2ZB22_CIOSA H2ZB40_CIOSA H2ZB40_CIOSA H2ZBH2_CIOSA H2ZBH2_CIOSA H2ZBP8_CIOSA H2ZBP8_CIOSA H2ZC83_CIOSA H2ZC83_CIOSA H2Y482_CIOSA H2Y482_CIOSA H2Y4M5_CIOSA H2Y4M5_CIOSA H2Y5T3_CIOSA H2Y5T3_CIOSA H2Y5V5_CIOSA H2Y5V5_CIOSA H2Y6G7_CIOSA H2Y6G7_CIOSA H2Y6I0_CIOSA H2Y6I0_CIOSA H2Y6S9_CIOSA H2Y6S9_CIOSA H2Y721_CIOSA H2Y721_CIOSA H2Y7F6_CIOSA H2Y7F6_CIOSA H2Y874_CIOSA H2Y874_CIOSA H2Y9S8_CIOSA H2Y9S8_CIOSA H2ZRD4_CIOSA H2ZRD4_CIOSA H2ZRD3_CIOSA H2ZRD3_CIOSA H2ZRB8_CIOSA H2ZRB8_CIOSA H2ZR76_CIOSA H2ZR76_CIOSA H2ZR34_CIOSA H2ZR34_CIOSA H2ZCN7_CIOSA H2ZCN7_CIOSA H2ZCV9_CIOSA H2ZCV9_CIOSA H2YAI0_CIOSA H2YAI0_CIOSA H2YAQ4_CIOSA H2YAQ4_CIOSA H2YBE1_CIOSA H2YBE1_CIOSA H2YBT2_CIOSA H2YBT2_CIOSA H2YBU2_CIOSA H2YBU2_CIOSA H2YCK7_CIOSA H2YCK7_CIOSA H2YCV5_CIOSA H2YCV5_CIOSA H2YCW1_CIOSA H2YCW1_CIOSA H2YCW4_CIOSA H2YCW4_CIOSA H2YDQ5_CIOSA H2YDQ5_CIOSA H2YDS8_CIOSA H2YDS8_CIOSA H2YF23_CIOSA H2YF23_CIOSA H2YFA0_CIOSA H2YFA0_CIOSA H2YFV4_CIOSA H2YFV4_CIOSA H2YFW7_CIOSA H2YFW7_CIOSA H2YG65_CIOSA H2YG65_CIOSA H2ZD07_CIOSA H2ZD07_CIOSA H2ZDH2_CIOSA H2ZDH2_CIOSA H2ZDK8_CIOSA H2ZDK8_CIOSA H2ZE01_CIOSA H2ZE01_CIOSA H2ZE12_CIOSA H2ZE12_CIOSA H2ZE63_CIOSA H2ZE63_CIOSA H2ZE95_CIOSA H2ZE95_CIOSA H2ZEG7_CIOSA H2ZEG7_CIOSA H2ZFE4_CIOSA H2ZFE4_CIOSA H2ZPF8_CIOSA H2ZPF8_CIOSA H2ZP16_CIOSA H2ZP16_CIOSA H2YG84_CIOSA H2YG84_CIOSA H2YGQ7_CIOSA H2YGQ7_CIOSA H2YGX0_CIOSA H2YGX0_CIOSA H2YHK9_CIOSA H2YHK9_CIOSA H2YHP1_CIOSA H2YHP1_CIOSA H2YIB7_CIOSA H2YIB7_CIOSA H2YIJ0_CIOSA H2YIJ0_CIOSA H2YJH8_CIOSA H2YJH8_CIOSA H2YL40_CIOSA H2YL40_CIOSA H2YL99_CIOSA H2YL99_CIOSA H2YLA3_CIOSA H2YLA3_CIOSA H2YLH3_CIOSA H2YLH3_CIOSA H2YM54_CIOSA H2YM54_CIOSA H2YM63_CIOSA H2YM63_CIOSA H2YM90_CIOSA H2YM90_CIOSA H2YMD3_CIOSA H2YMD3_CIOSA H2YMQ4_CIOSA H2YMQ4_CIOSA H2YNH8_CIOSA H2YNH8_CIOSA H2YNV0_CIOSA H2YNV0_CIOSA H2YNV7_CIOSA H2YNV7_CIOSA H2YPG7_CIOSA H2YPG7_CIOSA H2YPS4_CIOSA H2YPS4_CIOSA H2YPX2_CIOSA H2YPX2_CIOSA H2YPZ6_CIOSA H2YPZ6_CIOSA H2YQ43_CIOSA H2YQ43_CIOSA H2YQR9_CIOSA H2YQR9_CIOSA H2YRF1_CIOSA H2YRF1_CIOSA EIF6 EIF6 H2YS54_CIOSA H2YS54_CIOSA H2YSB3_CIOSA H2YSB3_CIOSA H2YSV5_CIOSA H2YSV5_CIOSA H2YUK6_CIOSA H2YUK6_CIOSA H2YV57_CIOSA H2YV57_CIOSA H2YW50_CIOSA H2YW50_CIOSA H2YWB5_CIOSA H2YWB5_CIOSA H2YXE7_CIOSA H2YXE7_CIOSA H2YXW9_CIOSA H2YXW9_CIOSA H2ZNR9_CIOSA H2ZNR9_CIOSA H2ZNR6_CIOSA H2ZNR6_CIOSA H2ZNR4_CIOSA H2ZNR4_CIOSA H2ZNP8_CIOSA H2ZNP8_CIOSA H2ZNM1_CIOSA H2ZNM1_CIOSA H2ZMY4_CIOSA H2ZMY4_CIOSA H2ZLF9_CIOSA H2ZLF9_CIOSA H2ZKZ6_CIOSA H2ZKZ6_CIOSA H2ZKS0_CIOSA H2ZKS0_CIOSA H2ZKM7_CIOSA H2ZKM7_CIOSA H2ZKH4_CIOSA H2ZKH4_CIOSA H2ZK95_CIOSA H2ZK95_CIOSA H2ZHM3_CIOSA H2ZHM3_CIOSA H2ZGZ5_CIOSA H2ZGZ5_CIOSA H2ZGF0_CIOSA H2ZGF0_CIOSA H2ZG41_CIOSA H2ZG41_CIOSA H2ZQA0_CIOSA H2ZQA0_CIOSA H2ZQD2_CIOSA H2ZQD2_CIOSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2YJS5_CIOSANucleolar protein 6. (1071 aa)
H2ZQ59_CIOSAUncharacterized protein; Belongs to the DEAD box helicase family. (446 aa)
H2ZQ34_CIOSAUncharacterized protein; Belongs to the PI3/PI4-kinase family. (702 aa)
H2YY65_CIOSANUC173 domain-containing protein. (814 aa)
H2YZS6_CIOSAH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (193 aa)
H2Z072_CIOSARibosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (399 aa)
H2Z0D6_CIOSARNase III domain-containing protein. (277 aa)
H2Z0F6_CIOSAzf-LYAR domain-containing protein. (195 aa)
H2Z0H6_CIOSAUncharacterized protein. (385 aa)
H2Z0S1_CIOSAWD_REPEATS_REGION domain-containing protein. (445 aa)
H2Z0Y6_CIOSAUncharacterized protein. (220 aa)
H2Z130_CIOSAUncharacterized protein. (218 aa)
H2Z1B4_CIOSARibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (639 aa)
H2Z203_CIOSASAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (409 aa)
H2Z2N1_CIOSAUncharacterized protein; Belongs to the DEAD box helicase family. (484 aa)
H2Z2Q9_CIOSARIO domain-containing protein. (499 aa)
H2Z3R5_CIOSAPeptidyl-prolyl cis-trans isomerase. (123 aa)
H2Z3R6_CIOSAUncharacterized protein; Belongs to the AAA ATPase family. (592 aa)
H2Z4C6_CIOSAWD_REPEATS_REGION domain-containing protein. (529 aa)
H2Z4D7_CIOSAUncharacterized protein. (111 aa)
H2Z4H2_CIOSAUncharacterized protein. (123 aa)
H2Z4R2_CIOSAUncharacterized protein. (280 aa)
H2Z4X4_CIOSACCHC-type domain-containing protein. (303 aa)
H2Z6S1_CIOSAUncharacterized protein. (65 aa)
H2Z6U7_CIOSAPseudoU_synth_2 domain-containing protein. (293 aa)
H2Z6U9_CIOSAPseudoU_synth_2 domain-containing protein. (423 aa)
H2Z7K9_CIOSAUncharacterized protein. (1284 aa)
H2Z7U1_CIOSARNase_PH domain-containing protein. (247 aa)
H2Z7V4_CIOSAUncharacterized protein. (183 aa)
H2Z902_CIOSAUncharacterized protein. (2500 aa)
H2Z976_CIOSAUncharacterized protein. (252 aa)
H2Z9M2_CIOSARibosomal_L7Ae domain-containing protein. (278 aa)
H2Z9U4_CIOSAUncharacterized protein. (181 aa)
H2Z9X8_CIOSA40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (80 aa)
H2ZAV4_CIOSAKRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (349 aa)
H2ZB16_CIOSABrix domain-containing protein. (306 aa)
H2ZB22_CIOSAUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
H2ZB40_CIOSAUncharacterized protein. (438 aa)
H2ZBH2_CIOSAWD_REPEATS_REGION domain-containing protein. (436 aa)
H2ZBP8_CIOSAZP domain-containing protein. (267 aa)
H2ZC83_CIOSAATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (762 aa)
H2Y482_CIOSANopRA1 domain-containing protein. (253 aa)
H2Y4M5_CIOSAUncharacterized protein. (175 aa)
H2Y5T3_CIOSAHIT-type domain-containing protein. (131 aa)
H2Y5V5_CIOSAUncharacterized protein. (441 aa)
H2Y6G7_CIOSABP28CT domain-containing protein. (2105 aa)
H2Y6I0_CIOSAUncharacterized protein; Belongs to the DEAD box helicase family. (476 aa)
H2Y6S9_CIOSAHIT-type domain-containing protein. (131 aa)
H2Y721_CIOSABrix domain-containing protein. (288 aa)
H2Y7F6_CIOSAS4 RNA-binding domain-containing protein. (181 aa)
H2Y874_CIOSAPseudoU_synth_2 domain-containing protein. (515 aa)
H2Y9S8_CIOSAPIH1_CS domain-containing protein. (210 aa)
H2ZRD4_CIOSAUncharacterized protein. (172 aa)
H2ZRD3_CIOSASAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (338 aa)
H2ZRB8_CIOSARibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (324 aa)
H2ZR76_CIOSAUncharacterized protein. (337 aa)
H2ZR34_CIOSARibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (280 aa)
H2ZCN7_CIOSANUC153 domain-containing protein. (649 aa)
H2ZCV9_CIOSAHRDC domain-containing protein. (586 aa)
H2YAI0_CIOSARRM domain-containing protein. (305 aa)
H2YAQ4_CIOSAUncharacterized protein. (317 aa)
H2YBE1_CIOSAUncharacterized protein. (861 aa)
H2YBT2_CIOSAUncharacterized protein. (270 aa)
H2YBU2_CIOSAUncharacterized protein. (244 aa)
H2YCK7_CIOSA40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (212 aa)
H2YCV5_CIOSABms1-type G domain-containing protein. (780 aa)
H2YCW1_CIOSAZP domain-containing protein. (267 aa)
H2YCW4_CIOSAWD_REPEATS_REGION domain-containing protein. (414 aa)
H2YDQ5_CIOSAUncharacterized protein. (307 aa)
H2YDS8_CIOSASm domain-containing protein. (82 aa)
H2YF23_CIOSARNase_PH domain-containing protein. (264 aa)
H2YFA0_CIOSAUncharacterized protein. (306 aa)
H2YFV4_CIOSASpoU_sub_bind domain-containing protein. (228 aa)
H2YFW7_CIOSAUncharacterized protein. (255 aa)
H2YG65_CIOSAUncharacterized protein. (260 aa)
H2ZD07_CIOSARNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (409 aa)
H2ZDH2_CIOSArRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (309 aa)
H2ZDK8_CIOSAUncharacterized protein. (1115 aa)
H2ZE01_CIOSAUncharacterized protein. (192 aa)
H2ZE12_CIOSAUncharacterized protein. (1099 aa)
H2ZE63_CIOSAUncharacterized protein. (776 aa)
H2ZE95_CIOSAUncharacterized protein. (290 aa)
H2ZEG7_CIOSAMethyltranfer_dom domain-containing protein. (256 aa)
H2ZFE4_CIOSAUncharacterized protein. (442 aa)
H2ZPF8_CIOSAUncharacterized protein. (325 aa)
H2ZP16_CIOSAIpi1_N domain-containing protein. (258 aa)
H2YG84_CIOSARNase_PH domain-containing protein. (270 aa)
H2YGQ7_CIOSAUncharacterized protein. (224 aa)
H2YGX0_CIOSAKri1_C domain-containing protein. (508 aa)
H2YHK9_CIOSAUncharacterized protein. (392 aa)
H2YHP1_CIOSAH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (215 aa)
H2YIB7_CIOSARNA helicase. (561 aa)
H2YIJ0_CIOSASerine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (535 aa)
H2YJH8_CIOSAUncharacterized protein. (220 aa)
H2YL40_CIOSAPutative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (718 aa)
H2YL99_CIOSABrix domain-containing protein. (299 aa)
H2YLA3_CIOSAUncharacterized protein. (242 aa)
H2YLH3_CIOSAS1 motif domain-containing protein. (274 aa)
H2YM54_CIOSAUncharacterized protein. (394 aa)
H2YM63_CIOSAUncharacterized protein. (71 aa)
H2YM90_CIOSATPR_REGION domain-containing protein. (291 aa)
H2YMD3_CIOSA40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (112 aa)
H2YMQ4_CIOSARRM domain-containing protein. (247 aa)
H2YNH8_CIOSABms1-type G domain-containing protein. (1082 aa)
H2YNV0_CIOSAUncharacterized protein. (905 aa)
H2YNV7_CIOSAUncharacterized protein. (505 aa)
H2YPG7_CIOSAMethyltransf_25 domain-containing protein. (222 aa)
H2YPS4_CIOSAPeptidase_M24 domain-containing protein. (390 aa)
H2YPX2_CIOSAUncharacterized protein. (209 aa)
H2YPZ6_CIOSAUncharacterized protein. (206 aa)
H2YQ43_CIOSAUncharacterized protein. (295 aa)
H2YQR9_CIOSAUncharacterized protein. (159 aa)
H2YRF1_CIOSArRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (383 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (246 aa)
H2YS54_CIOSAWD_REPEATS_REGION domain-containing protein. (697 aa)
H2YSB3_CIOSARNA helicase. (531 aa)
H2YSV5_CIOSAPINc domain-containing protein. (190 aa)
H2YUK6_CIOSASAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (424 aa)
H2YV57_CIOSAUncharacterized protein. (131 aa)
H2YW50_CIOSAUncharacterized protein. (236 aa)
H2YWB5_CIOSAUncharacterized protein. (362 aa)
H2YXE7_CIOSAProtein MAK16 homolog; Belongs to the MAK16 family. (295 aa)
H2YXW9_CIOSARibosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (407 aa)
H2ZNR9_CIOSAMethyltranfer_dom domain-containing protein. (222 aa)
H2ZNR6_CIOSAUncharacterized protein. (221 aa)
H2ZNR4_CIOSAMethyltranfer_dom domain-containing protein. (221 aa)
H2ZNP8_CIOSAUncharacterized protein. (300 aa)
H2ZNM1_CIOSAUncharacterized protein. (528 aa)
H2ZMY4_CIOSAProbable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis. (204 aa)
H2ZLF9_CIOSAUncharacterized protein; Belongs to the DEAD box helicase family. (641 aa)
H2ZKZ6_CIOSAWD_REPEATS_REGION domain-containing protein. (392 aa)
H2ZKS0_CIOSAExonuclease domain-containing protein. (194 aa)
H2ZKM7_CIOSABrix domain-containing protein. (296 aa)
H2ZKH4_CIOSAUncharacterized protein. (839 aa)
H2ZK95_CIOSASas10 domain-containing protein. (449 aa)
H2ZHM3_CIOSAPUA domain-containing protein. (510 aa)
H2ZGZ5_CIOSAUtp12 domain-containing protein. (420 aa)
H2ZGF0_CIOSANucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (650 aa)
H2ZG41_CIOSAUncharacterized protein. (328 aa)
H2ZQA0_CIOSAU3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (218 aa)
H2ZQD2_CIOSAUncharacterized protein. (214 aa)
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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