4 items (Ciona savignyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2ZB85_CIOSA	Non-specific serine/threonine protein kinase. (606 aa)
	H2Y6B4_CIOSA	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (364 aa)
	H2YMM2_CIOSA	Uncharacterized protein. (685 aa)
	H2Z7E2_CIOSA	Uncharacterized protein. (249 aa)

Your Current Organism:

Ciona savignyi

NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2Y6B4_CIOSA	H2Z7E2_CIOSA	ENSCSAVP00000000862	ENSCSAVP00000013504	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.693
H2Y6B4_CIOSA	H2ZB85_CIOSA	ENSCSAVP00000000862	ENSCSAVP00000014850	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Non-specific serine/threonine protein kinase.	0.634
H2Z7E2_CIOSA	H2Y6B4_CIOSA	ENSCSAVP00000013504	ENSCSAVP00000000862	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.693
H2ZB85_CIOSA	H2Y6B4_CIOSA	ENSCSAVP00000014850	ENSCSAVP00000000862	Non-specific serine/threonine protein kinase.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.634