(5 nodes) Monosaccharide binding, and Periplasmic binding protein domain network (Butyrivibrio proteoclasticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bpr_I1169	Sugar ABC transporter substrate-binding protein. (365 aa)
	bpr_I1172	Xylose ABC transporter substrate binding protein. (349 aa)
	bpr_I1173	Xylose ABC transporter substrate-binding protein. (359 aa)
	bpr_I1174	Xylose ABC transporter ATP-binding protein. (517 aa)
	bpr_I1175	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (396 aa)

Your Current Organism:

Butyrivibrio proteoclasticus

NCBI taxonomy Id: 515622
Other names: B. proteoclasticus B316, Butyrivibrio proteoclasticus B316, Butyrivibrio proteoclasticus str. B316, Butyrivibrio proteoclasticus strain B316

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
bpr_I1169	bpr_I1172	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter substrate binding protein.	0.994
bpr_I1169	bpr_I1173	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter substrate-binding protein.	0.973
bpr_I1169	bpr_I1174	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter ATP-binding protein.	0.790
bpr_I1169	bpr_I1175	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.962
bpr_I1172	bpr_I1169	Xylose ABC transporter substrate binding protein.	Sugar ABC transporter substrate-binding protein.	0.994
bpr_I1172	bpr_I1173	Xylose ABC transporter substrate binding protein.	Xylose ABC transporter substrate-binding protein.	0.957
bpr_I1172	bpr_I1174	Xylose ABC transporter substrate binding protein.	Xylose ABC transporter ATP-binding protein.	0.862
bpr_I1172	bpr_I1175	Xylose ABC transporter substrate binding protein.	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.986
bpr_I1173	bpr_I1169	Xylose ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.973
bpr_I1173	bpr_I1172	Xylose ABC transporter substrate-binding protein.	Xylose ABC transporter substrate binding protein.	0.957
bpr_I1173	bpr_I1174	Xylose ABC transporter substrate-binding protein.	Xylose ABC transporter ATP-binding protein.	0.913
bpr_I1173	bpr_I1175	Xylose ABC transporter substrate-binding protein.	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.993
bpr_I1174	bpr_I1169	Xylose ABC transporter ATP-binding protein.	Sugar ABC transporter substrate-binding protein.	0.790
bpr_I1174	bpr_I1172	Xylose ABC transporter ATP-binding protein.	Xylose ABC transporter substrate binding protein.	0.862
bpr_I1174	bpr_I1173	Xylose ABC transporter ATP-binding protein.	Xylose ABC transporter substrate-binding protein.	0.913
bpr_I1174	bpr_I1175	Xylose ABC transporter ATP-binding protein.	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.961
bpr_I1175	bpr_I1169	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter substrate-binding protein.	0.962
bpr_I1175	bpr_I1172	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	Xylose ABC transporter substrate binding protein.	0.986
bpr_I1175	bpr_I1173	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	Xylose ABC transporter substrate-binding protein.	0.993
bpr_I1175	bpr_I1174	Xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	Xylose ABC transporter ATP-binding protein.	0.961

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