(11 nodes) Periplasmic binding protein network (Butyrivibrio proteoclasticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bpr_I0881	Sugar ABC transporter substrate-binding protein. (354 aa)
	bpr_I0909	Sugar ABC transporter substrate-binding protein. (400 aa)
	bpr_I1169	Sugar ABC transporter substrate-binding protein. (365 aa)
	bpr_I1172	Xylose ABC transporter substrate binding protein. (349 aa)
	bpr_I1173	Xylose ABC transporter substrate-binding protein. (359 aa)
	bpr_I2116	Sugar ABC transporter substrate-binding protein. (335 aa)
	bpr_I2119	Transcriptional regulator LacI family. (329 aa)
	ADL35898.1	Sugar ABC transporter substrate-binding protein. (365 aa)
	ADL35926.1	Sugar ABC transporter substrate-binding protein. (348 aa)
	ADL35930.1	Sugar ABC transporter substrate-binding protein. (330 aa)
	ADL35934.1	Sugar ABC transporter substrate-binding protein. (394 aa)

Your Current Organism:

Butyrivibrio proteoclasticus

NCBI taxonomy Id: 515622
Other names: B. proteoclasticus B316, Butyrivibrio proteoclasticus B316, Butyrivibrio proteoclasticus str. B316, Butyrivibrio proteoclasticus strain B316

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADL35898.1	ADL35926.1	bpr_III212	bpr_III240	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.414
ADL35898.1	ADL35934.1	bpr_III212	bpr_III248	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.536
ADL35898.1	bpr_I1169	bpr_III212	bpr_I1169	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.922
ADL35898.1	bpr_I1172	bpr_III212	bpr_I1172	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter substrate binding protein.	0.614
ADL35898.1	bpr_I1173	bpr_III212	bpr_I1173	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter substrate-binding protein.	0.544
ADL35926.1	ADL35898.1	bpr_III240	bpr_III212	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.414
ADL35926.1	ADL35930.1	bpr_III240	bpr_III244	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.956
ADL35926.1	ADL35934.1	bpr_III240	bpr_III248	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.770
ADL35926.1	bpr_I0881	bpr_III240	bpr_I0881	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.692
ADL35926.1	bpr_I1172	bpr_III240	bpr_I1172	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter substrate binding protein.	0.758
ADL35926.1	bpr_I1173	bpr_III240	bpr_I1173	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter substrate-binding protein.	0.742
ADL35926.1	bpr_I2116	bpr_III240	bpr_I2116	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.731
ADL35930.1	ADL35926.1	bpr_III244	bpr_III240	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.956
ADL35930.1	ADL35934.1	bpr_III244	bpr_III248	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.522
ADL35930.1	bpr_I0881	bpr_III244	bpr_I0881	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.665
ADL35930.1	bpr_I1172	bpr_III244	bpr_I1172	Sugar ABC transporter substrate-binding protein.	Xylose ABC transporter substrate binding protein.	0.722
ADL35930.1	bpr_I2116	bpr_III244	bpr_I2116	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.721
ADL35934.1	ADL35898.1	bpr_III248	bpr_III212	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.536
ADL35934.1	ADL35926.1	bpr_III248	bpr_III240	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.770
ADL35934.1	ADL35930.1	bpr_III248	bpr_III244	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter substrate-binding protein.	0.522

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