STRINGSTRING
Dtur_0385 Dtur_0385 Dtur_0408 Dtur_0408 Dtur_0409 Dtur_0409 fucI fucI rbsA rbsA Dtur_0412 Dtur_0412 Dtur_0413 Dtur_0413 Dtur_0414 Dtur_0414 rbsA-2 rbsA-2 Dtur_0416 Dtur_0416 Dtur_0417 Dtur_0417 Dtur_0418 Dtur_0418 Dtur_0427 Dtur_0427 Dtur_0428 Dtur_0428 Dtur_1642 Dtur_1642 Dtur_1643 Dtur_1643 rbsA-3 rbsA-3 Dtur_1666 Dtur_1666 rbsA-4 rbsA-4 Dtur_1668 Dtur_1668
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dtur_0385KEGG: dth:DICTH_0118 tagatose 6 phosphate kinase. (408 aa)
Dtur_0408Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: dth:DICTH_0280 DeoR-family transcriptional regulator. (257 aa)
Dtur_0409Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0291 transcriptional regulator. (342 aa)
fucIL-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (606 aa)
rbsAABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (494 aa)
Dtur_0412Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: dth:DICTH_0294 ribose transport system permease protein RbsC. (328 aa)
Dtur_0413PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0295 ABC sugar transporter, periplasmic ligand binding protein. (312 aa)
Dtur_0414TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0296 rhamnose ABC transporter, rhamnose-binding protein. (334 aa)
rbsA-2ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (503 aa)
Dtur_0416Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: dth:DICTH_0298 ribose transport system permease protein RbsC. (335 aa)
Dtur_0417Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: dth:DICTH_0299 ribose transport system permease protein RbsC. (318 aa)
Dtur_0418PFAM: protein of unknown function DUF1362; KEGG: dth:DICTH_0300 hypothetical protein. (124 aa)
Dtur_0427TIGRFAM: L-rhamnose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: dth:DICTH_0312 L-rhamnose isomerase. (397 aa)
Dtur_0428PFAM: carbohydrate kinase FGGY; KEGG: dth:DICTH_0313 L-fuculose kinase. (493 aa)
Dtur_1642Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: dth:DICTH_1533 ribose transport system permease protein RbsC. (317 aa)
Dtur_1643PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_1534 sugar ABC transporter, periplasmic sugar-binding protein. (338 aa)
rbsA-3ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (495 aa)
Dtur_1666Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: dth:DICTH_1558 ribose transport system permease protein RbsC. (327 aa)
rbsA-4ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (502 aa)
Dtur_1668KEGG: dth:DICTH_1560 ABC transporter sugar-binding protein. (331 aa)
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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