(7 nodes) Endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), and Alpha/beta knot methyltransferases network (Podospora anserina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090CGP0	WD_REPEATS_REGION domain-containing protein. (446 aa)
	A0A090D4J0	Putative nucleolar complex protein 4. (543 aa)
	PODANS_1_24010	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (413 aa)
	PODANS_1_11460	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (254 aa)
	PODANS_3_4960	Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2. (555 aa)
	PODANS_2_11040	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (192 aa)
	PODANS_5_5480	Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 6. (286 aa)

Your Current Organism:

Podospora anserina

NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A090CGP0	A0A090D4J0	A0A090CGP0	A0A090D4J0	WD_REPEATS_REGION domain-containing protein.	Putative nucleolar complex protein 4.	0.999
A0A090CGP0	PODANS_1_11460	A0A090CGP0	B2AYL0	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.998
A0A090CGP0	PODANS_1_24010	A0A090CGP0	B2ASM7	WD_REPEATS_REGION domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
A0A090CGP0	PODANS_2_11040	A0A090CGP0	B2B7G6	WD_REPEATS_REGION domain-containing protein.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.997
A0A090CGP0	PODANS_3_4960	A0A090CGP0	B2AZM9	WD_REPEATS_REGION domain-containing protein.	Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2.	0.999
A0A090CGP0	PODANS_5_5480	A0A090CGP0	B2VLA6	WD_REPEATS_REGION domain-containing protein.	Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 6.	0.997
A0A090D4J0	A0A090CGP0	A0A090D4J0	A0A090CGP0	Putative nucleolar complex protein 4.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A090D4J0	PODANS_1_11460	A0A090D4J0	B2AYL0	Putative nucleolar complex protein 4.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
A0A090D4J0	PODANS_1_24010	A0A090D4J0	B2ASM7	Putative nucleolar complex protein 4.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
A0A090D4J0	PODANS_2_11040	A0A090D4J0	B2B7G6	Putative nucleolar complex protein 4.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.997
A0A090D4J0	PODANS_3_4960	A0A090D4J0	B2AZM9	Putative nucleolar complex protein 4.	Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2.	0.999
A0A090D4J0	PODANS_5_5480	A0A090D4J0	B2VLA6	Putative nucleolar complex protein 4.	Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 6.	0.999
PODANS_1_11460	A0A090CGP0	B2AYL0	A0A090CGP0	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	WD_REPEATS_REGION domain-containing protein.	0.998
PODANS_1_11460	A0A090D4J0	B2AYL0	A0A090D4J0	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Putative nucleolar complex protein 4.	0.999
PODANS_1_11460	PODANS_1_24010	B2AYL0	B2ASM7	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
PODANS_1_11460	PODANS_2_11040	B2AYL0	B2B7G6	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.999
PODANS_1_11460	PODANS_3_4960	B2AYL0	B2AZM9	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2.	0.999
PODANS_1_11460	PODANS_5_5480	B2AYL0	B2VLA6	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 6.	0.998
PODANS_1_24010	A0A090CGP0	B2ASM7	A0A090CGP0	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD_REPEATS_REGION domain-containing protein.	0.999
PODANS_1_24010	A0A090D4J0	B2ASM7	A0A090D4J0	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Putative nucleolar complex protein 4.	0.999