STRINGSTRING
PODANS_1_5110 PODANS_1_5110 PODANS_1_6340 PODANS_1_6340 PODANS_4_4040 PODANS_4_4040 PODANS_1_10980 PODANS_1_10980 PODANS_2_3550 PODANS_2_3550 PODANS_2_6510 PODANS_2_6510 PODANS_2_12390 PODANS_2_12390
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PODANS_1_5110Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (1177 aa)
PODANS_1_6340Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (356 aa)
PODANS_4_4040Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4; Belongs to the alpha-IPM synthase/homocitrate synthase family. (452 aa)
PODANS_1_10980Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (374 aa)
PODANS_2_3550Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (440 aa)
PODANS_2_6510Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. (781 aa)
PODANS_2_12390Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (804 aa)
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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