STRINGSTRING
PODANS_1_4240 PODANS_1_4240 PODANS_1_21290 PODANS_1_21290 PODANS_5_5120 PODANS_5_5120 PODANS_4_4110 PODANS_4_4110 PODANS_4_3440 PODANS_4_3440 PODANS_3_8470 PODANS_3_8470
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PODANS_1_4240Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (246 aa)
PODANS_1_21290Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 5. (497 aa)
PODANS_5_5120Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 5. (367 aa)
PODANS_4_4110Fumarylacetoacetase. (441 aa)
PODANS_4_3440Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4. (459 aa)
PODANS_3_84704-hydroxyphenylpyruvate dioxygenase. (418 aa)
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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