(20 nodes) 90S preribosome, and Maturation of SSU-rRNA network (Podospora anserina)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	A0A090CBS5	Putative U3 small nucleolar RNA-associated protein 17. (944 aa)
	A0A090CFN8	Putative Ribosome biogenesis protein BMS1 homolog. (1168 aa)
	NAT10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1014 aa)
	PODANS_1_7790	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (634 aa)
	PODANS_1_4630	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (2620 aa)
	PODANS_3_10610	Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 3. (386 aa)
	PODANS_4_2560	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (771 aa)
	PODANS_5_2210	Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 1. (413 aa)
	PODANS_5_8820	U3 small nucleolar RNA-associated protein 22. (1117 aa)
	PODANS_4_9260	Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4. (506 aa)
	PODANS_4_6890	Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4. (940 aa)
	PODANS_4_6680	Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4. (579 aa)
	PODANS_1_22450	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 6. (368 aa)
	PODANS_1_17590	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 4. (961 aa)
	PODANS_7_1690	Podospora anserina S mat+ genomic DNA chromosome 7, supercontig 1. (1768 aa)
	PODANS_2_730	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (323 aa)
	PODANS_2_1860	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (183 aa)
	PODANS_2_9240	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (909 aa)
	PODANS_2_9720	Putative U3 small nucleolar ribonucleoprotein protein similar to IMP4 of Debaryomyces hansenii. (296 aa)
	PODANS_2_11820	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (900 aa)

Your Current Organism:

Podospora anserina

NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A090CBS5	A0A090CFN8	A0A090CBS5	A0A090CFN8	Putative U3 small nucleolar RNA-associated protein 17.	Putative Ribosome biogenesis protein BMS1 homolog.	0.999
A0A090CBS5	NAT10	A0A090CBS5	A0A090CTU0	Putative U3 small nucleolar RNA-associated protein 17.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.989
A0A090CBS5	PODANS_1_17590	A0A090CBS5	B2AU08	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 4.	0.998
A0A090CBS5	PODANS_1_22450	A0A090CBS5	B2AS60	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 6.	0.965
A0A090CBS5	PODANS_1_4630	A0A090CBS5	B2AAN5	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.	0.999
A0A090CBS5	PODANS_1_7790	A0A090CBS5	B2A8Y2	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.	0.998
A0A090CBS5	PODANS_2_11820	A0A090CBS5	B2B7P8	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.999
A0A090CBS5	PODANS_2_1860	A0A090CBS5	B2B4N3	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.994
A0A090CBS5	PODANS_2_730	A0A090CBS5	B2B4B7	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.998
A0A090CBS5	PODANS_2_9240	A0A090CBS5	B2B6X9	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.997
A0A090CBS5	PODANS_2_9720	A0A090CBS5	B2B730	Putative U3 small nucleolar RNA-associated protein 17.	Putative U3 small nucleolar ribonucleoprotein protein similar to IMP4 of Debaryomyces hansenii.	0.996
A0A090CBS5	PODANS_3_10610	A0A090CBS5	B2AD28	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 3.	0.999
A0A090CBS5	PODANS_4_2560	A0A090CBS5	B2AE19	Putative U3 small nucleolar RNA-associated protein 17.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.999
A0A090CBS5	PODANS_4_6680	A0A090CBS5	B2ARQ9	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4.	0.989
A0A090CBS5	PODANS_4_6890	A0A090CBS5	B2ARN8	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4.	0.994
A0A090CBS5	PODANS_4_9260	A0A090CBS5	B2AQY7	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4.	0.994
A0A090CBS5	PODANS_5_2210	A0A090CBS5	B2AEL2	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 1.	0.999
A0A090CBS5	PODANS_5_8820	A0A090CBS5	B2AL59	Putative U3 small nucleolar RNA-associated protein 17.	U3 small nucleolar RNA-associated protein 22.	0.999
A0A090CBS5	PODANS_7_1690	A0A090CBS5	B2AVV3	Putative U3 small nucleolar RNA-associated protein 17.	Podospora anserina S mat+ genomic DNA chromosome 7, supercontig 1.	0.999
A0A090CFN8	A0A090CBS5	A0A090CFN8	A0A090CBS5	Putative Ribosome biogenesis protein BMS1 homolog.	Putative U3 small nucleolar RNA-associated protein 17.	0.999