STRINGSTRING
PODANS_1_23400 PODANS_1_23400 PODANS_2_1140 PODANS_2_1140 PODANS_4_940 PODANS_4_940 PODANS_5_890 PODANS_5_890 PODANS_5_9150 PODANS_5_9150 PODANS_1_13720 PODANS_1_13720 PODANS_6_6560 PODANS_6_6560
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PODANS_1_23400UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (374 aa)
PODANS_2_1140Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (340 aa)
PODANS_4_940Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 1. (265 aa)
PODANS_5_890Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 1. (344 aa)
PODANS_5_9150Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. (519 aa)
PODANS_1_13720Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 3. (509 aa)
PODANS_6_6560Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. (385 aa)
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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