(23 nodes) 90S preribosome network (Podospora anserina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090D4J0	Putative nucleolar complex protein 4. (543 aa)
	PODANS_2_11820	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (900 aa)
	PODANS_2_9720	Putative U3 small nucleolar ribonucleoprotein protein similar to IMP4 of Debaryomyces hansenii. (296 aa)
	PODANS_2_9240	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (909 aa)
	PODANS_2_1860	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (183 aa)
	PODANS_2_730	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (323 aa)
	PODANS_1_10300	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 2. (912 aa)
	PODANS_7_10320	Podospora anserina S mat+ genomic DNA chromosome 7, supercontig 1. (699 aa)
	PODANS_1_17590	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 4. (961 aa)
	PODANS_1_23730	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 6. (1162 aa)
	PODANS_4_3120	Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4. (515 aa)
	PODANS_4_3900	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (337 aa)
	PODANS_1_13160	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 3. (409 aa)
	PODANS_1_13880	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (275 aa)
	PODANS_5_8820	U3 small nucleolar RNA-associated protein 22. (1117 aa)
	PODANS_5_2210	Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 1. (413 aa)
	PODANS_4_2560	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (771 aa)
	PODANS_1_4630	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (2620 aa)
	PODANS_1_4380	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (901 aa)
	PODANS_1_3240	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (789 aa)
	PODANS_1_2330	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (877 aa)
	PODANS_1_7790	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (634 aa)
	A0A090CFN8	Putative Ribosome biogenesis protein BMS1 homolog. (1168 aa)

Your Current Organism:

Podospora anserina

NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A090CFN8	A0A090D4J0	A0A090CFN8	A0A090D4J0	Putative Ribosome biogenesis protein BMS1 homolog.	Putative nucleolar complex protein 4.	0.995
A0A090CFN8	PODANS_1_10300	A0A090CFN8	B2AY92	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 2.	0.999
A0A090CFN8	PODANS_1_13160	A0A090CFN8	B2ALX7	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 3.	0.999
A0A090CFN8	PODANS_1_17590	A0A090CFN8	B2AU08	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 4.	0.999
A0A090CFN8	PODANS_1_2330	A0A090CFN8	B2A9Z8	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.	0.999
A0A090CFN8	PODANS_1_23730	A0A090CFN8	B2ASJ7	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 6.	0.999
A0A090CFN8	PODANS_1_3240	A0A090CFN8	B2AA89	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.	0.922
A0A090CFN8	PODANS_1_4380	A0A090CFN8	B2AAL0	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.	0.992
A0A090CFN8	PODANS_1_4630	A0A090CFN8	B2AAN5	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.	0.999
A0A090CFN8	PODANS_1_7790	A0A090CFN8	B2A8Y2	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.	0.999
A0A090CFN8	PODANS_2_11820	A0A090CFN8	B2B7P8	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.998
A0A090CFN8	PODANS_2_1860	A0A090CFN8	B2B4N3	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.996
A0A090CFN8	PODANS_2_730	A0A090CFN8	B2B4B7	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.998
A0A090CFN8	PODANS_2_9240	A0A090CFN8	B2B6X9	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.	0.998
A0A090CFN8	PODANS_2_9720	A0A090CFN8	B2B730	Putative Ribosome biogenesis protein BMS1 homolog.	Putative U3 small nucleolar ribonucleoprotein protein similar to IMP4 of Debaryomyces hansenii.	0.997
A0A090CFN8	PODANS_4_2560	A0A090CFN8	B2AE19	Putative Ribosome biogenesis protein BMS1 homolog.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.999
A0A090CFN8	PODANS_5_2210	A0A090CFN8	B2AEL2	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 1.	0.998
A0A090CFN8	PODANS_5_8820	A0A090CFN8	B2AL59	Putative Ribosome biogenesis protein BMS1 homolog.	U3 small nucleolar RNA-associated protein 22.	0.999
A0A090CFN8	PODANS_7_10320	A0A090CFN8	B2AXE9	Putative Ribosome biogenesis protein BMS1 homolog.	Podospora anserina S mat+ genomic DNA chromosome 7, supercontig 1.	0.826
A0A090D4J0	A0A090CFN8	A0A090D4J0	A0A090CFN8	Putative nucleolar complex protein 4.	Putative Ribosome biogenesis protein BMS1 homolog.	0.995