STRINGSTRING
PODANS_2_11820 PODANS_2_11820 A0A090C9D5 A0A090C9D5 A0A090CHY9 A0A090CHY9 PODANS_1_7790 PODANS_1_7790 PODANS_3_10610 PODANS_3_10610 PODANS_5_2210 PODANS_5_2210 PODANS_1_23730 PODANS_1_23730 PODANS_1_17590 PODANS_1_17590
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PODANS_2_11820Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2. (900 aa)
A0A090C9D5Uncharacterized protein. (1296 aa)
A0A090CHY9Putative Polysaccharide Lyase Family 3. (239 aa)
PODANS_1_7790Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1. (634 aa)
PODANS_3_10610Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 3. (386 aa)
PODANS_5_2210Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 1. (413 aa)
PODANS_1_23730Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 6. (1162 aa)
PODANS_1_17590Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 4. (961 aa)
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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