STRINGSTRING
Cpar_0009 Cpar_0009 Cpar_0010 Cpar_0010 Cpar_0027 Cpar_0027 Cpar_0028 Cpar_0028 Cpar_0029 Cpar_0029 Cpar_0317 Cpar_0317 Cpar_0318 Cpar_0318 Cpar_0320 Cpar_0320 Cpar_0875 Cpar_0875 Cpar_0945 Cpar_0945 Cpar_0946 Cpar_0946 Cpar_0947 Cpar_0947 Cpar_0948 Cpar_0948 Cpar_0949 Cpar_0949 Cpar_0950 Cpar_0950 Cpar_1010 Cpar_1010 Cpar_1074 Cpar_1074 Cpar_1082 Cpar_1082
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cpar_0009PFAM: cytochrome c class I; KEGG: cte:CT2080 sulfide dehydrogenase, cytochrome subunit. (114 aa)
Cpar_0010PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: cte:CT2081 sulfide dehydrogenase, flavoprotein subunit. (428 aa)
Cpar_0027TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: cte:CT2250 sulfite reductase, dissimilatory-type, gamma subunit. (111 aa)
Cpar_0028KEGG: cte:CT2249 sulfite reductase, dissimilatory-type, alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region. (418 aa)
Cpar_0029KEGG: cte:CT0853 sulfite reductase, dissimilatory-type, beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region. (359 aa)
Cpar_0317PFAM: nickel-dependent hydrogenase large subunit; KEGG: cte:CT1894 hydrogenase/sulfur reductase, alpha subunit. (424 aa)
Cpar_0318PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cte:CT1893 hydrogenase/sulfur reductase, delta subunit. (255 aa)
Cpar_0320KEGG: cte:CT1891 hydrogenase/sulfur reductase, beta subunit. (359 aa)
Cpar_0875PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cte:CT0876 sulfide-quinone reductase, putative. (425 aa)
Cpar_0945PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cte:CT1250 hydrogenase/sulfur reductase, gamma subunit. (278 aa)
Cpar_0946KEGG: cte:CT1249 hydrogenase/sulfur reductase, beta subunit. (337 aa)
Cpar_0947PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT1248 hydrogenase, iron-sulfur binding protein, putative. (276 aa)
Cpar_0948PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: cte:CT1247 hydrogenase, methyl-violgen-reducing type, delta subunit. (149 aa)
Cpar_0949PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: cte:CT1246 heterodisulfide reductase, subunit A. (657 aa)
Cpar_0950CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cte:CT1245 heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C. (500 aa)
Cpar_1010PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cte:CT1087 sulfide-quinone reductase. (390 aa)
Cpar_1074PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cte:CT1025 sulfide dehydrogenase, flavoprotein subunit, putative. (408 aa)
Cpar_1082PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: pvi:Cvib_0149 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit. (431 aa)
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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