STRINGSTRING
Cpar_1982 Cpar_1982 Cpar_1983 Cpar_1983 Cpar_0009 Cpar_0009 Cpar_1081 Cpar_1081 Cpar_1194 Cpar_1194 Cpar_1628 Cpar_1628 Cpar_1658 Cpar_1658 Cpar_1660 Cpar_1660 Cpar_1667 Cpar_1667 Cpar_1855 Cpar_1855 Cpar_1904 Cpar_1904
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cpar_1982PFAM: cytochrome c class I; KEGG: plt:Plut_0153 cytochrome c-555, membrane-bound. (138 aa)
Cpar_1983PFAM: cytochrome c class I; KEGG: cte:CT0075 cytochrome c-555. (108 aa)
Cpar_0009PFAM: cytochrome c class I; KEGG: cte:CT2080 sulfide dehydrogenase, cytochrome subunit. (114 aa)
Cpar_1081KEGG: pvi:Cvib_0148 monoheme cytochrome SoxX (sulfur oxidation). (117 aa)
Cpar_1194Hypothetical protein; KEGG: cph:Cpha266_0148 cytochrome c, class I. (256 aa)
Cpar_1628KEGG: pvi:Cvib_1352 cytochrome c, putative. (132 aa)
Cpar_1658PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: cch:Cag_1357 cytochrome-c oxidase FixO chain. (223 aa)
Cpar_1660PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III. (154 aa)
Cpar_1667PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III. (145 aa)
Cpar_1855KEGG: cte:CT0188 C-type cytochrome, putative. (111 aa)
Cpar_1904PFAM: cytochrome c class I; KEGG: cte:CT2026 C-type cytochrome, putative. (148 aa)
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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