STRINGSTRING
Cpar_0386 Cpar_0386 Cpar_0560 Cpar_0560 Cpar_0633 Cpar_0633 Cpar_0634 Cpar_0634 Cpar_1453 Cpar_1453 Cpar_1875 Cpar_1875 Cpar_1876 Cpar_1876 Cpar_1916 Cpar_1916 Cpar_1917 Cpar_1917 Cpar_1918 Cpar_1918 Cpar_2025 Cpar_2025 Cpar_2026 Cpar_2026 Cpar_2027 Cpar_2027
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cpar_0386PFAM: Aldehyde Dehydrogenase_; KEGG: cte:CT1573 aldehyde dehydrogenase family protein. (457 aa)
Cpar_0560PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cte:CT1628 pyruvate flavodoxin/ferrodoxin oxidoreductase. (1178 aa)
Cpar_0633TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: cte:CT0617 acetolactate synthase small subunit. (159 aa)
Cpar_0634TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cte:CT0618 acetolactate synthase large subunit. (573 aa)
Cpar_1453PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sun:SUN_2140 acetolactate synthase, large subunit; Belongs to the TPP enzyme family. (598 aa)
Cpar_1875PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: pvi:Cvib_1597 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. (616 aa)
Cpar_1876PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: pvi:Cvib_1598 2-oxoglutarate ferredoxin oxidoreductase subunit beta. (342 aa)
Cpar_1916CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cte:CT2040 succinate/fumarate oxidoreductase, putative. (283 aa)
Cpar_1917TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: cte:CT2041 succinate/fumarate oxidoreductase, iron-sulfur protein, putative. (345 aa)
Cpar_1918KEGG: cte:CT2042 succinate/fumarate oxidoreductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (567 aa)
Cpar_2025PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT2266 succinate dehydrogenase, iron-sulfur protein. (257 aa)
Cpar_2026KEGG: cte:CT2267 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (646 aa)
Cpar_2027TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: cte:CT2268 succinate dehydrogenase, cytochrome subunit, putative. (222 aa)
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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