STRINGSTRING
Huta_0692 Huta_0692 Huta_0695 Huta_0695 Huta_0697 Huta_0697 Huta_0705 Huta_0705 Huta_0706 Huta_0706 Huta_2099 Huta_2099
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Huta_0692KEGG: hma:rrnAC1458 NADH dehydrogenase/oxidoreductase; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (496 aa)
Huta_0695PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: hsl:OE1963F NADH dehydrogenase-like complex subunit K. (100 aa)
Huta_0697KEGG: hma:rrnAC1452 NADH dehydrogenase subunit J. (90 aa)
Huta_0705KEGG: hsl:OE1954F NADH dehydrogenase-like complex subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit. (231 aa)
Huta_0706PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: nph:NP2292A NADH dehydrogenase-like complex, subunit A. (135 aa)
Huta_2099PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_4108 NADH dehydrogenase (quinone). (634 aa)
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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