STRINGSTRING
Huta_1206 Huta_1206 Huta_1207 Huta_1207 Huta_1208 Huta_1208 Huta_1209 Huta_1209 Huta_1210 Huta_1210 Huta_1211 Huta_1211 Huta_1212 Huta_1212 Huta_1213 Huta_1213 Huta_1214 Huta_1214 Huta_1216 Huta_1216 Huta_1217 Huta_1217 Huta_1218 Huta_1218 Huta_1318 Huta_1318 Huta_1412 Huta_1412 Huta_1539 Huta_1539
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Huta_1206KEGG: hma:rrnAC3321 hypothetical protein. (203 aa)
Huta_1207PFAM: ribonuclease H; KEGG: hma:rrnAC3320 ribonuclease H-like protein. (198 aa)
Huta_1208PFAM: cation transporter; KEGG: hwa:HQ1686A trk-type potassium transport system, permease protein TrkH. (512 aa)
Huta_1209PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: hma:rrnAC1536 potassium transporter peripheral membrane component. (448 aa)
Huta_1210Putative transcriptional regulator, AsnC family; PFAM: TrkA-C domain protein; SMART: regulatory protein AsnC/Lrp family; KEGG: hsl:OE2844R lrp-type transcriptional regulator. (255 aa)
Huta_1211KEGG: hma:rrnAC0756 hypothetical protein. (165 aa)
Huta_1212PFAM: UspA domain protein; KEGG: nph:NP0044A hypothetical protein. (147 aa)
Huta_1213PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: hsl:OE1290F TrkA domain-containing protein. (228 aa)
Huta_1214PFAM: UspA domain protein; KEGG: hma:rrnAC0758 universal stress protein. (140 aa)
Huta_1216PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: hsl:OE1290F TrkA domain-containing protein. (229 aa)
Huta_1217PFAM: cation transporter; KEGG: hsl:OE2841R potassium transport system protein trkH1. (513 aa)
Huta_1218KEGG: hsl:OE2840R hypothetical protein. (72 aa)
Huta_1318PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: hwa:HQ3102A potassium transport protein KefC. (628 aa)
Huta_1412PFAM: cation transporter; KEGG: nph:NP4906A trk-type transport system (substrate potassium) 1, subunit 2.2. (516 aa)
Huta_1539PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: hma:rrnAC2498 trk potassium uptake system protein. (222 aa)
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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