STRINGSTRING
Huta_0388 Huta_0388 Huta_0389 Huta_0389 Huta_0390 Huta_0390 Huta_1003 Huta_1003 Huta_1233 Huta_1233 Huta_1234 Huta_1234 Huta_1237 Huta_1237 Huta_1871 Huta_1871 Huta_1872 Huta_1872 Huta_1873 Huta_1873 Huta_1874 Huta_1874 Huta_1875 Huta_1875 Huta_1876 Huta_1876 Huta_1877 Huta_1877 Huta_1878 Huta_1878 Huta_1879 Huta_1879 Huta_1880 Huta_1880 Huta_1881 Huta_1881 Huta_1882 Huta_1882 Huta_1883 Huta_1883
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Huta_0388TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1; KEGG: hma:rrnAC0147 thiamine-binding periplasmic protein precursor-like. (388 aa)
Huta_0389PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hsl:OE4358F thiamine ABC transporter permease. (597 aa)
Huta_0390PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hsl:OE4359F thiamine ABC transporter ATP- binding protein. (352 aa)
Huta_1003PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hma:rrnAC3108 TPR repeat-containing protein. (251 aa)
Huta_1233Hypothetical protein; KEGG: cef:CE0448 putative ABC transporter substrate- binding protein. (393 aa)
Huta_1234PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmu:PM1455 AfuB. (582 aa)
Huta_1237PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tpe:Tpen_1553 spermidine/putrescine ABC transporter ATPase subunit. (368 aa)
Huta_1871PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: hsl:OE2509R oxidoreductase-like protein. (545 aa)
Huta_1872KEGG: hsl:OE2510R hypothetical protein. (181 aa)
Huta_1873KEGG: hsl:OE2338R hypothetical protein. (670 aa)
Huta_1874PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: nph:NP3648A spermidine/putrescine/iron ABC transporter ATP-binding protein. (378 aa)
Huta_1875PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hma:rrnAC0907 iron ABC transporter permease protein. (545 aa)
Huta_1876PFAM: extracellular solute-binding protein family 1; KEGG: hma:rrnAC0906 iron-binding protein. (423 aa)
Huta_1877KEGG: hma:rrnAC0905 hypothetical protein. (386 aa)
Huta_1878PFAM: protein of unknown function DUF502; KEGG: mgm:Mmc1_2681 protein of unknown function DUF502. (234 aa)
Huta_1879KEGG: hma:rrnAC2614 hypothetical protein. (167 aa)
Huta_1880TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF58; protein of unknown function DUF11; KEGG: hsl:OE1356F hypothetical protein. (652 aa)
Huta_1881KEGG: hsl:OE1352F hypothetical protein. (313 aa)
Huta_1882PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: hma:rrnAC1698 methanol dehydrogenase regulatory protein. (321 aa)
Huta_1883Hypothetical protein. (149 aa)
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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