STRINGSTRING
Huta_1046 Huta_1046 Huta_0300 Huta_0300 Huta_0091 Huta_0091 Huta_0057 Huta_0057 Huta_2854 Huta_2854 Huta_2837 Huta_2837 Huta_2760 Huta_2760 Huta_2210 Huta_2210
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Huta_1046PFAM: major facilitator superfamily MFS_1; KEGG: nph:NP0888A major facilitator family multidrug efflux transporter tetracyclin resistance protein. (398 aa)
Huta_0300KEGG: hma:rrnAC1105 hypothetical protein. (260 aa)
Huta_0091PFAM: MscS Mechanosensitive ion channel; KEGG: hma:rrnAC1347 putative mechanosensitive ion channel. (297 aa)
Huta_0057PFAM: MscS Mechanosensitive ion channel; KEGG: hma:rrnAC1733 hypothetical protein. (421 aa)
Huta_2854PFAM: MscS Mechanosensitive ion channel; KEGG: smd:Smed_5647 MscS mechanosensitive ion channel. (314 aa)
Huta_2837PFAM: MscS Mechanosensitive ion channel; KEGG: hma:rrnAC3218 mechanosensitive ion channel. (366 aa)
Huta_2760PFAM: MscS Mechanosensitive ion channel; KEGG: hma:rrnAC0285 hypothetical protein. (344 aa)
Huta_2210KEGG: hma:rrnAC0279 hypothetical protein. (183 aa)
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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