STRINGSTRING
Huta_2119 Huta_2119 Huta_2191 Huta_2191 Huta_2484 Huta_2484 Huta_2568 Huta_2568 Huta_2585 Huta_2585 Huta_2769 Huta_2769 Huta_1305 Huta_1305 Huta_0913 Huta_0913 Huta_0497 Huta_0497 Huta_0162 Huta_0162 Huta_1244 Huta_1244 Huta_1342 Huta_1342 Huta_1592 Huta_1592 Huta_1821 Huta_1821 Huta_1850 Huta_1850
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Huta_2119KEGG: hypothetical protein. (729 aa)
Huta_2191PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hma:pNG7276 ferrichrome ABC transporter ATP- binding protein. (313 aa)
Huta_2484PFAM: ABC-2 type transporter; KEGG: nph:NP2440A ABC-type transport system permease protein. (263 aa)
Huta_2568PFAM: ABC-3 protein; KEGG: hma:rrnAC0500 ABC transporter permease protein. (361 aa)
Huta_2585PFAM: extracellular solute-binding protein family 5; KEGG: tpd:Teth39_2187 extracellular solute-binding protein. (603 aa)
Huta_2769PFAM: ABC-2 type transporter; KEGG: rxy:Rxyl_1548 ABC-2 type transporter. (413 aa)
Huta_1305PFAM: extracellular solute-binding protein family 5; KEGG: tte:TTE0054 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components. (693 aa)
Huta_0913KEGG: hsl:OE4485R phosphate ABC transporter periplasmic substrate-binding protein. (357 aa)
Huta_0497PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 hypothetical protein. (286 aa)
Huta_0162TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: hma:rrnAC2280 cobalt transport protein. (264 aa)
Huta_1244PFAM: extracellular solute-binding protein family 5; KEGG: nph:NP2986A dipeptide/oligopeptide/nickel ABC transporter periplasmic substrate-binding protein. (588 aa)
Huta_1342PFAM: ABC-2 type transporter; KEGG: syp:SYNPCC7002_G0063 ABC transporter, permease protein. (279 aa)
Huta_1592KEGG: hsl:OE4485R phosphate ABC transporter periplasmic substrate-binding protein. (373 aa)
Huta_1821PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mem:Memar_2100 ABC transporter-related protein. (274 aa)
Huta_1850PFAM: extracellular solute-binding protein family 5; KEGG: nth:Nther_2201 extracellular solute-binding protein family 5. (672 aa)
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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