STRINGSTRING
Huta_1023 Huta_1023 Huta_1874 Huta_1874 Huta_0390 Huta_0390 Huta_1020 Huta_1020 Huta_1237 Huta_1237
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Huta_1023Putative transcriptional regulator, ModE family; PFAM: TOBE domain protein; regulatory protein LysR; KEGG: hma:rrnAC3264 putative molybdenum-binding protein. (235 aa)
Huta_1874PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: nph:NP3648A spermidine/putrescine/iron ABC transporter ATP-binding protein. (378 aa)
Huta_0390PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hsl:OE4359F thiamine ABC transporter ATP- binding protein. (352 aa)
Huta_1020PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hwa:HQ1421A ABC transporter ATP-binding protein. (352 aa)
Huta_1237PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tpe:Tpen_1553 spermidine/putrescine ABC transporter ATPase subunit. (368 aa)
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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