STRINGSTRING
Huta_0509 Huta_0509 trpB trpB Huta_0932 Huta_0932 trpB-2 trpB-2 Huta_1259 Huta_1259 Huta_1493 Huta_1493 Huta_1526 Huta_1526 Huta_2712 Huta_2712 Huta_2793 Huta_2793
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Huta_0509TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: nph:NP3116A cysteine synthase 2. (302 aa)
trpBTryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (387 aa)
Huta_0932PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: hsl:OE1916F cysteine synthase. (327 aa)
trpB-2Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (416 aa)
Huta_1259PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: hma:rrnAC2515 threonine synthase. (356 aa)
Huta_1493Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (423 aa)
Huta_1526TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: hma:rrnAC2508 threonine dehydratase. (403 aa)
Huta_2712TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: hma:rrnAC0137 cysteine synthase. (304 aa)
Huta_2793PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: hma:rrnAC3505 threonine synthase. (391 aa)
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.