STRINGSTRING
Tpau_0113 Tpau_0113 Tpau_0124 Tpau_0124 Tpau_0125 Tpau_0125 Tpau_0174 Tpau_0174 Tpau_0175 Tpau_0175 Tpau_0297 Tpau_0297 Tpau_0341 Tpau_0341 Tpau_0342 Tpau_0342 Tpau_0381 Tpau_0381 Tpau_0387 Tpau_0387 Tpau_0389 Tpau_0389 Tpau_0425 Tpau_0425 Tpau_0426 Tpau_0426 Tpau_0427 Tpau_0427 Tpau_0428 Tpau_0428 Tpau_0429 Tpau_0429 Tpau_0430 Tpau_0430 Tpau_0443 Tpau_0443 Tpau_0444 Tpau_0444 Tpau_0576 Tpau_0576 Tpau_0678 Tpau_0678 Tpau_0702 Tpau_0702 Tpau_0775 Tpau_0775 Tpau_0860 Tpau_0860 Tpau_1031 Tpau_1031 Tpau_1058 Tpau_1058 Tpau_1104 Tpau_1104 Tpau_1124 Tpau_1124 Tpau_1180 Tpau_1180 Tpau_1209 Tpau_1209 Tpau_1210 Tpau_1210 Tpau_1265 Tpau_1265 Tpau_1304 Tpau_1304 Tpau_1315 Tpau_1315 Tpau_1317 Tpau_1317 Tpau_1329 Tpau_1329 Tpau_1341 Tpau_1341 Tpau_1373 Tpau_1373 Tpau_1382 Tpau_1382 Tpau_1547 Tpau_1547 Tpau_1578 Tpau_1578 Tpau_1688 Tpau_1688 Tpau_1725 Tpau_1725 Tpau_1726 Tpau_1726 Tpau_1805 Tpau_1805 Tpau_1806 Tpau_1806 Tpau_1807 Tpau_1807 Tpau_1850 Tpau_1850 Tpau_1853 Tpau_1853 Tpau_1855 Tpau_1855 Tpau_1856 Tpau_1856 Tpau_1857 Tpau_1857 Tpau_1858 Tpau_1858 Tpau_1859 Tpau_1859 Tpau_1860 Tpau_1860 Tpau_1861 Tpau_1861 Tpau_1862 Tpau_1862 Tpau_1863 Tpau_1863 Tpau_1864 Tpau_1864 Tpau_1865 Tpau_1865 Tpau_1866 Tpau_1866 Tpau_1872 Tpau_1872 Tpau_2081 Tpau_2081 Tpau_2082 Tpau_2082 Tpau_2109 Tpau_2109 Tpau_2118 Tpau_2118 Tpau_2193 Tpau_2193 Tpau_2227 Tpau_2227 Tpau_2228 Tpau_2228 Tpau_2229 Tpau_2229 Tpau_2230 Tpau_2230 Tpau_2231 Tpau_2231 Tpau_2465 Tpau_2465 Tpau_2466 Tpau_2466 Tpau_2467 Tpau_2467 Tpau_2468 Tpau_2468 Tpau_2499 Tpau_2499 Tpau_2533 Tpau_2533 Tpau_2552 Tpau_2552 Tpau_2680 Tpau_2680 Tpau_2682 Tpau_2682 Tpau_2701 Tpau_2701 Tpau_2724 Tpau_2724 acpP acpP Tpau_2726 Tpau_2726 Tpau_2827 Tpau_2827 Tpau_2831 Tpau_2831 Tpau_2858 Tpau_2858 Tpau_2916 Tpau_2916 Tpau_2917 Tpau_2917 Tpau_2974 Tpau_2974 Tpau_3028 Tpau_3028 Tpau_3029 Tpau_3029 Tpau_3043 Tpau_3043 Tpau_3315 Tpau_3315 Tpau_3319 Tpau_3319 Tpau_3320 Tpau_3320 Tpau_3321 Tpau_3321 Tpau_3363 Tpau_3363 Tpau_3447 Tpau_3447 Tpau_3474 Tpau_3474 Tpau_3475 Tpau_3475 Tpau_3476 Tpau_3476 Tpau_3477 Tpau_3477 Tpau_3478 Tpau_3478 Tpau_3479 Tpau_3479 Tpau_3480 Tpau_3480 Tpau_3517 Tpau_3517 Tpau_3562 Tpau_3562 Tpau_3598 Tpau_3598 Tpau_3599 Tpau_3599 Tpau_3600 Tpau_3600 Tpau_3601 Tpau_3601 Tpau_3606 Tpau_3606 Tpau_3608 Tpau_3608 Tpau_3662 Tpau_3662 Tpau_3663 Tpau_3663 Tpau_3667 Tpau_3667 Tpau_3683 Tpau_3683 Tpau_3684 Tpau_3684 Tpau_3685 Tpau_3685 Tpau_3686 Tpau_3686 Tpau_3687 Tpau_3687 Tpau_3688 Tpau_3688 Tpau_3689 Tpau_3689 Tpau_3690 Tpau_3690 Tpau_3691 Tpau_3691 Tpau_3692 Tpau_3692 Tpau_3693 Tpau_3693 Tpau_3788 Tpau_3788 Tpau_3797 Tpau_3797 Tpau_3798 Tpau_3798 Tpau_3800 Tpau_3800 Tpau_3801 Tpau_3801 Tpau_3803 Tpau_3803 Tpau_3804 Tpau_3804 Tpau_3805 Tpau_3805 Tpau_3806 Tpau_3806 Tpau_3807 Tpau_3807 Tpau_3813 Tpau_3813 Tpau_3814 Tpau_3814 Tpau_3815 Tpau_3815 Tpau_3816 Tpau_3816 Tpau_3818 Tpau_3818 Tpau_3819 Tpau_3819 Tpau_3820 Tpau_3820 Tpau_3822 Tpau_3822 Tpau_3824 Tpau_3824 Tpau_3825 Tpau_3825 Tpau_3826 Tpau_3826 Tpau_3827 Tpau_3827 Tpau_3828 Tpau_3828 Tpau_3829 Tpau_3829 Tpau_3832 Tpau_3832 Tpau_3833 Tpau_3833 Tpau_3834 Tpau_3834 Tpau_3835 Tpau_3835 Tpau_3836 Tpau_3836 Tpau_3837 Tpau_3837 Tpau_3838 Tpau_3838 Tpau_3839 Tpau_3839 Tpau_3840 Tpau_3840 Tpau_3842 Tpau_3842 Tpau_3843 Tpau_3843 Tpau_3844 Tpau_3844 Tpau_3845 Tpau_3845 Tpau_3846 Tpau_3846 Tpau_3848 Tpau_3848 Tpau_3849 Tpau_3849 Tpau_3850 Tpau_3850 Tpau_3851 Tpau_3851 Tpau_3852 Tpau_3852 Tpau_3853 Tpau_3853 Tpau_3854 Tpau_3854 Tpau_3855 Tpau_3855 Tpau_3856 Tpau_3856 Tpau_3857 Tpau_3857 Tpau_3858 Tpau_3858 Tpau_3859 Tpau_3859 Tpau_3941 Tpau_3941 Tpau_3969 Tpau_3969 Tpau_3985 Tpau_3985 Tpau_3987 Tpau_3987 Tpau_4116 Tpau_4116 Tpau_4117 Tpau_4117 Tpau_4122 Tpau_4122 Tpau_4181 Tpau_4181 Tpau_4182 Tpau_4182 Tpau_4183 Tpau_4183
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
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Tpau_0113Isochorismatase; KEGG: mab:MAB_4406 isochorismatase/phenazine biosynthesis protein PhzD; PFAM: isochorismatase hydrolase. (260 aa)
Tpau_0124PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro04000 short chain dehydrogenase. (252 aa)
Tpau_0125PFAM: protein of unknown function UPF0016; KEGG: rha:RHA1_ro04005 hypothetical protein. (235 aa)
Tpau_0174PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_39420 long-chain fatty acyl-AMP ligase FadD32. (636 aa)
Tpau_0175PFAM: Beta-ketoacyl synthase; Acyl transferase; Thioesterase; phosphopantetheine-binding; KEGG: rha:RHA1_ro04065 polyketide synthase. (1704 aa)
Tpau_0297PFAM: condensation domain protein; KEGG: nfa:nfa30230 hypothetical protein. (492 aa)
Tpau_0341TIGRFAM: acetyl-CoA acetyltransferase; KEGG: svi:Svir_30250 acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
Tpau_0342PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB. (730 aa)
Tpau_0381PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rop:ROP_14630 histamine dehydrogenase. (700 aa)
Tpau_0387PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase. (283 aa)
Tpau_0389PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase. (252 aa)
Tpau_0425Hypothetical protein. (35 aa)
Tpau_0426PFAM: MaoC domain protein dehydratase; KEGG: rha:RHA1_ro05198 MaoC-like dehydratase. (294 aa)
Tpau_0427PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_52490 putative 3-oxoacyl-[acyl- carrier-protein] reductase. (452 aa)
Tpau_0428TIGRFAM: acetyl-CoA acetyltransferase; KEGG: nfa:nfa54600 acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (427 aa)
Tpau_0429PFAM: CoA-binding domain protein; KEGG: stp:Strop_0728 CoA-binding domain-containing protein. (140 aa)
Tpau_0430Hypothetical protein. (167 aa)
Tpau_0443PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ckp:ckrop_0178 putative short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)
Tpau_0444PFAM: AMP-dependent synthetase and ligase; KEGG: nfa:nfa7120 acyl-CoA synthetase. (542 aa)
Tpau_0576PFAM: flavin reductase domain protein FMN-binding; KEGG: mul:MUL_4138 oxidase. (188 aa)
Tpau_0678PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_3588 putative acyl-CoA oxidase. (654 aa)
Tpau_0702PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro02736 acyl CoA dehydrogenase. (606 aa)
Tpau_0775TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rer:RER_56240 acetyl-CoA acyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
Tpau_0860PFAM: carboxyl transferase; KEGG: rer:RER_45670 acetyl-CoA carboxylase beta chain. (509 aa)
Tpau_1031PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rer:RER_21210 acyl-CoA carboxylase alpha chain. (602 aa)
Tpau_1058PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mab:MAB_3618c acyl-CoA dehydrogenase FadE. (386 aa)
Tpau_1104PFAM: Male sterility domain; KR domain protein; 3- beta hydroxysteroid dehydrogenase/isomerase; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro06221 short chain dehydrogenase. (701 aa)
Tpau_1124PFAM: AMP-dependent synthetase and ligase; KEGG: nfa:nfa30980 acyl-CoA synthetase. (509 aa)
Tpau_1180PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KEGG: mkm:Mkms_2663 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (279 aa)
Tpau_1209PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_41250 alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)
Tpau_1210PFAM: regulatory protein TetR; KEGG: rer:RER_41230 TetR family transcriptional regulator. (216 aa)
Tpau_1265TIGRFAM: acetyl-CoA acetyltransferase; KEGG: mav:MAV_1544 acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
Tpau_1304PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_40980 long-chain fatty-acid--CoA ligase. (591 aa)
Tpau_1315PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: nfa:nfa12570 putative fatty acid synthase. (3102 aa)
Tpau_1317PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carboxyl transferase; biotin/lipoyl attachment domain- containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: tfu:Tfu_1530 acetyl/propionyl-CoA carboxylase alpha subunit. (1811 aa)
Tpau_1329PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: svi:Svir_17470 acyl-CoA dehydrogenase. (389 aa)
Tpau_1341PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro01416 short chain dehydrogenase. (268 aa)
Tpau_1373Thioester reductase domain protein; KEGG: mab:MAB_2962 fatty-acid-CoA ligase FadD; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain; AMP-dependent synthetase and ligase; phosphopantetheine-binding. (1105 aa)
Tpau_1382PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: svi:Svir_23320 Zn-dependent oxidoreductase, NADPH:quinone reductase. (324 aa)
Tpau_1547PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_2283 putative short-chain dehydrogenase/reductase. (269 aa)
Tpau_1578PFAM: condensation domain protein; KEGG: pde:Pden_2564 enterobactin synthase subunit F. (597 aa)
Tpau_1688PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein. (243 aa)
Tpau_1725PFAM: metallophosphoesterase; KEGG: rha:RHA1_ro06649 metallophosphoesterase. (328 aa)
Tpau_1726PFAM: 4'-phosphopantetheinyl transferase; KEGG: rer:RER_26380 phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (223 aa)
Tpau_1805KEGG: nfa:nfa23590 putative transcriptional regulator. (199 aa)
Tpau_1806PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_2495 acyl-CoA dehydrogenase. (410 aa)
Tpau_1807PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mjl:Mjls_1723 acyl-CoA dehydrogenase domain- containing protein. (381 aa)
Tpau_1850PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: sgr:SGR_4769 putative acyl-CoA dehydrogenase. (385 aa)
Tpau_1853PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa34120 3-ketoacyl-(acyl-carrier- protein) reductase. (251 aa)
Tpau_1855PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro01498 quinone oxidoreductase. (329 aa)
Tpau_1856KEGG: rha:RHA1_ro02725 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. (224 aa)
Tpau_1857PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro02340 3-oxoacyl-[acyl-carrier- protein] reductase. (251 aa)
Tpau_1858Enoyl-CoA hydratase; KEGG: sma:SAV_6603 hypothetical protein; PFAM: MaoC domain protein dehydratase. (150 aa)
Tpau_1859PFAM: aminoglycoside phosphotransferase; KEGG: rha:RHA1_ro02722 phosphotransferase. (338 aa)
Tpau_1860PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nfa:nfa34080 putative acyl-CoA dehydrogenase. (407 aa)
Tpau_1861PFAM: acyl-CoA dehydrogenase domain protein; KEGG: svi:Svir_16750 acyl-CoA dehydrogenase. (395 aa)
Tpau_1862PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rop:ROP_12060 putative acyl-CoA dehydrogenase. (361 aa)
Tpau_1863Aryldialkylphosphatase; KEGG: rha:RHA1_ro01514 phosphotriesterase; PFAM: aryldialkylphosphatase. (326 aa)
Tpau_1864PFAM: AMP-dependent synthetase and ligase; KEGG: cai:Caci_4379 AMP-dependent synthetase and ligase. (506 aa)
Tpau_1865PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rop:ROP_12170 putative MFS transporter. (463 aa)
Tpau_1866PFAM: regulatory protein TetR; KEGG: rop:ROP_23970 putative TetR family transcriptional regulator. (207 aa)
Tpau_1872PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; carboxyl transferase; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rha:RHA1_ro02782 carboxylase. (1054 aa)
Tpau_2081KEGG: rop:ROP_70010 3-oxoacyl-[acyl-carrier- protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase. (249 aa)
Tpau_2082Enoyl-(acyl-carrier-protein) reductase (NADH); KEGG: nfa:nfa34760 enoyl-(acyl carrier protein) reductase. (279 aa)
Tpau_2109PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: mab:MAB_2167 putative 3-oxoacyl-ACP synthase III. (337 aa)
Tpau_2118PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_53370 fatty-acid--CoA ligase. (545 aa)
Tpau_2193TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: nfa:nfa52820 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; Belongs to the thiolase-like superfamily. FabH family. (356 aa)
Tpau_2227PFAM: cytochrome P450; KEGG: rer:pREC1_0055 cytochrome P450. (446 aa)
Tpau_2228PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ank:AnaeK_1527 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (363 aa)
Tpau_2229PFAM: aminoglycoside phosphotransferase; KEGG: rha:RHA1_ro10360 hypothetical protein. (356 aa)
Tpau_2230PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: bja:bll4020 short chain dehydrogenase. (241 aa)
Tpau_2231KEGG: btl:BALH_1036 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III. (328 aa)
Tpau_2465Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: rha:RHA1_ro00436 hypothetical protein. (202 aa)
Tpau_2466PFAM: Uncharacterised conserved protein UCP07580; KEGG: rop:ROP_04670 hypothetical protein. (311 aa)
Tpau_2467KEGG: nfa:nfa11910 hypothetical protein. (383 aa)
Tpau_2468PFAM: Beta-ketoacyl synthase; KEGG: mva:Mvan_3756 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (434 aa)
Tpau_2499PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rop:ROP_52020 putative acyl-CoA dehydrogenase. (407 aa)
Tpau_2533PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mjl:Mjls_3197 acyl-CoA dehydrogenase domain- containing protein. (382 aa)
Tpau_2552PFAM: AMP-dependent synthetase and ligase; KEGG: nfa:nfa7120 acyl-CoA synthetase. (575 aa)
Tpau_2680PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro01121 long-chain-fatty-acid--CoA ligase. (601 aa)
Tpau_2682PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rop:ROP_66650 putative acyl-CoA dehydrogenase. (572 aa)
Tpau_2701PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase. (251 aa)
Tpau_2724PFAM: Acyl transferase; KEGG: nfa:nfa16150 acyl-carrier-protein S- malonyltransferase. (300 aa)
acpPPhosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (101 aa)
Tpau_2726PFAM: Beta-ketoacyl synthase; KEGG: mva:Mvan_3756 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (435 aa)
Tpau_2827PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rer:RER_17530 acyl-CoA dehydrogenase. (391 aa)
Tpau_2831PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rer:RER_17570 enoyl-CoA hydratase. (262 aa)
Tpau_2858PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV_1346 acid:CoA ligase. (485 aa)
Tpau_2916PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: rha:RHA1_ro06463 electron transfer flavoprotein alpha-subunit. (318 aa)
Tpau_2917PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: nfa:nfa42790 putative electron transfer flavoprotein beta subunit. (261 aa)
Tpau_2974PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_57060 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (309 aa)
Tpau_3028PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rha:RHA1_ro06400 butyryl-CoA dehydrogenase. (458 aa)
Tpau_3029PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nfa:nfa44930 putative acyl-CoA dehydrogenase. (411 aa)
Tpau_3043PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: krh:KRH_05060 putative glutaryl-CoA dehydrogenase. (402 aa)
Tpau_3315KEGG: mab:MAB_4376c putative acetoacetyl-CoA synthetase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase. (620 aa)
Tpau_3319PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mmi:MMAR_3847 acyl-CoA dehydrogenase FadE19. (382 aa)
Tpau_3320PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mgi:Mflv_2553 carbamoyl-phosphate synthase L chain, ATP-binding. (655 aa)
Tpau_3321KEGG: rha:RHA1_ro06095 fatty acid CoA carboxylase B subunit; PFAM: carboxyl transferase. (510 aa)
Tpau_3363PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rop:ROP_50970 putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (244 aa)
Tpau_3447PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa50680 putative oxidoreductase. (340 aa)
Tpau_3474KEGG: cai:Caci_1252 crotonyl-CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein. (441 aa)
Tpau_3475PFAM: Thioesterase; KEGG: fra:Francci3_2412 thioesterase. (269 aa)
Tpau_3476KEGG: stp:Strop_2778 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding. (2078 aa)
Tpau_3477PFAM: Acyl transferase; KR domain protein; Beta- ketoacyl synthase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: sgr:SGR_6073 putative type-I PKS. (3281 aa)
Tpau_3478PFAM: Acyl transferase; short-chain dehydrogenase/reductase SDR; Beta-ketoacyl synthase; KR domain protein; Erythronolide synthase docking; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: sen:SACE_4141 type I modular polyketide synthase. (1573 aa)
Tpau_3479PFAM: Acyl transferase; Beta-ketoacyl synthase; phosphopantetheine-binding; KEGG: sma:SAV_943 type I polyketide synthase AVES 4. (1077 aa)
Tpau_3480Mycocerosate synthase., 6-deoxyerythronolide-B synthase; KEGG: sen:SACE_4141 type I modular polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; Beta- ketoacyl synthase; KR domain protein; Acyl transferase; NAD-dependent epimerase/dehydratase; phosphopantetheine- binding. (4264 aa)
Tpau_3517PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mab:MAB_3918c putative oxidoreductase. (346 aa)
Tpau_3562PFAM: condensation domain protein; KEGG: mav:MAV_2005 PapA2 protein. (436 aa)
Tpau_3598KEGG: mab:MAB_4180 IclR family transcriptional regulator; PFAM: regulatory protein IclR; SMART: regulatory protein IclR. (290 aa)
Tpau_3599KEGG: mab:MAB_4179c hypothetical protein. (385 aa)
Tpau_3600PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mjl:Mjls_5029 short chain dehydrogenase. (258 aa)
Tpau_3601KEGG: mab:MAB_4177c hypothetical protein. (385 aa)
Tpau_3606PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro05664 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (278 aa)
Tpau_3608PFAM: Male sterility domain; KR domain protein; 3- beta hydroxysteroid dehydrogenase/isomerase; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rop:ROP_62800 putative acyl-CoA reductase. (637 aa)
Tpau_3662PFAM: low temperature requirement A; KEGG: rop:ROP_58670 hypothetical membrane protein. (412 aa)
Tpau_3663PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nfa:nfa30340 short chain dehydrogenase. (250 aa)
Tpau_3667KEGG: mab:MAB_4094c 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein. (289 aa)
Tpau_3683KEGG: rha:RHA1_ro04795 isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like. (368 aa)
Tpau_3684PFAM: isochorismatase hydrolase; KEGG: rer:RER_26990 isochorismatase. (207 aa)
Tpau_3685PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_48840 2,3-dihydroxybenzoate-AMP ligase. (558 aa)
Tpau_3686PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_48850 2,3-dihydro-2,3- dihydroxybenzoate dehydrogenase. (250 aa)
Tpau_3687PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: ami:Amir_2724 siderophore-interacting protein. (289 aa)
Tpau_3688KEGG: cef:CE1565 putative ABC transporter permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (609 aa)
Tpau_3689PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: fal:FRAAL4165 putative ABC transporter transmembrane protein. (560 aa)
Tpau_3690PFAM: formyl transferase domain protein; KEGG: rop:ROP_48100 putative formyltransferase. (311 aa)
Tpau_3691L-lysine 6-monooxygenase (NADPH); KEGG: rer:RER_09790 L-ornithine N5-oxygenase. (432 aa)
Tpau_3692PFAM: phosphopantetheine-binding; KEGG: rer:RER_26960 hypothetical protein. (80 aa)
Tpau_3693Amino acid adenylation domain protein; KEGG: rop:ROP_20370 non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein. (2274 aa)
Tpau_3788PFAM: regulatory protein TetR; KEGG: mjl:Mjls_5098 TetR family transcriptional regulator. (208 aa)
Tpau_3797PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rer:RER_07070 hypothetical protein. (694 aa)
Tpau_37982-oxopent-4-enoate hydratase; KEGG: rop:ROP_37500 putative 2-hydroxypenta-2,4- dienoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase. (261 aa)
Tpau_38004-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (349 aa)
Tpau_3801Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (302 aa)
Tpau_3803KEGG: mab:MAB_1289c hypothetical protein. (224 aa)
Tpau_3804PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bac:BamMC406_4593 short-chain dehydrogenase/reductase SDR. (253 aa)
Tpau_3805PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_09570 oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (296 aa)
Tpau_3806PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rer:RER_09550 acyl-CoA dehydrogenase. (394 aa)
Tpau_3807PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rha:RHA1_ro04692 acyl-CoA dehydrogenase. (360 aa)
Tpau_3813KEGG: rer:RER_08830 hypothetical protein. (213 aa)
Tpau_3814PPOX class putative F420-dependent enzyme; KEGG: msm:MSMEG_0048 pyridoxamine 5'-phosphate oxidase family protein; TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding. (165 aa)
Tpau_3815PFAM: 2-nitropropane dioxygenase NPD; KEGG: rer:RER_09370 oxidoreductase. (367 aa)
Tpau_3816PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro04688 enoyl-CoA hydratase. (263 aa)
Tpau_3818PFAM: protein of unknown function DUF35; KEGG: rop:ROP_47840 hypothetical protein. (320 aa)
Tpau_3819KEGG: rer:RER_09310 hypothetical protein. (358 aa)
Tpau_3820KEGG: nfa:nfa5210 acetyl-CoA acetyltransferase. (391 aa)
Tpau_3822TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rop:ROP_47770 putative acetyl-CoA acyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (386 aa)
Tpau_3824PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_47520 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)
Tpau_3825PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_47510 putative oxidoreductase. (261 aa)
Tpau_3826PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro04652 enoyl-CoA hydratase. (260 aa)
Tpau_3827PFAM: coenzyme A transferase; KEGG: stp:Strop_2605 coenzyme A transferase. (290 aa)
Tpau_3828PFAM: coenzyme A transferase; KEGG: nca:Noca_2745 putative CoA transferase beta subunit. (247 aa)
Tpau_3829PFAM: 2-nitropropane dioxygenase NPD; KEGG: rop:ROP_47470 putative oxidoreductase. (351 aa)
Tpau_3832TIGRFAM: acetyl-CoA acetyltransferase; KEGG: swi:Swit_3630 acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (387 aa)
Tpau_3833PFAM: regulatory protein TetR; KEGG: nfa:nfa4880 putative transcriptional regulator. (204 aa)
Tpau_3834PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cai:Caci_1368 short-chain dehydrogenase/reductase SDR. (270 aa)
Tpau_3835PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa4840 putative acyl-CoA dehydrogenase. (382 aa)
Tpau_3836PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_45400 putative fatty-acid--CoA ligase. (510 aa)
Tpau_3837PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa4820 enoyl-CoA hydratase. (300 aa)
Tpau_3838PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa4810 putative acyl-CoA dehydrogenase. (385 aa)
Tpau_3839PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mab:MAB_0594c acyl-CoA dehydrogenase FadE. (334 aa)
Tpau_3840PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nfa:nfa4790 putative acyl-CoA dehydrogenase. (350 aa)
Tpau_3842PFAM: flavin reductase domain protein FMN-binding; KEGG: rer:RER_07580 oxidoreductase. (190 aa)
Tpau_3843Biphenyl-2,3-diol 1,2-dioxygenase; KEGG: mab:MAB_0585 2,3-dihydroxybiphenyl 1,2- dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (301 aa)
Tpau_3844PFAM: alpha/beta hydrolase fold; KEGG: rop:ROP_44550 MetA-cleavage compound hydrolase. (289 aa)
Tpau_3845PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: rop:ROP_44540 putative hydroxylase. (391 aa)
Tpau_3846PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: nfa:nfa46590 hypothetical protein. (486 aa)
Tpau_3848PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rer:RER_07370 3-keto-5alpha-steroid delta(1)- dehydrogenase KstD3. (571 aa)
Tpau_3849Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rha:RHA1_ro04538 ketosteroid-9-alpha- hydroxylase, oxygenase. (393 aa)
Tpau_3850KEGG: saq:Sare_2881 hypothetical protein. (116 aa)
Tpau_3851PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mkm:Mkms_4796 ferredoxin. (360 aa)
Tpau_38523-alpha,7-alpha,12-alpha-trihydroxy-5-beta-chole st-24-enoyl-CoAhydratase; KEGG: rer:RER_07360 enoyl-CoA hydratase; PFAM: MaoC domain protein dehydratase. (285 aa)
Tpau_3853KEGG: nfa:nfa5190 hypothetical protein. (136 aa)
Tpau_3854PFAM: Luciferase-like, subgroup; KEGG: nfa:nfa29530 hypothetical protein. (288 aa)
Tpau_3855PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nca:Noca_2790 acyl-CoA dehydrogenase domain- containing protein. (751 aa)
Tpau_3856PFAM: protein of unknown function DUF35; KEGG: rha:RHA1_ro04486 hypothetical protein. (322 aa)
Tpau_3857KEGG: nfa:nfa4520 hypothetical protein. (138 aa)
Tpau_3858KEGG: rer:RER_07120 hypothetical protein. (390 aa)
Tpau_3859PFAM: thioesterase superfamily protein; KEGG: rer:RER_16990 hypothetical protein. (208 aa)
Tpau_3941PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rop:ROP_41680 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
Tpau_3969PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro04492 acyl-CoA synthetase. (500 aa)
Tpau_3985PFAM: MbtH domain protein; KEGG: mjl:Mjls_3474 MbtH domain-containing protein. (67 aa)
Tpau_3987TIGRFAM: amino acid adenylation domain protein; daunorubicin resistance ABC transporter ATPase subunit; PFAM: AMP-dependent synthetase and ligase; Thioesterase; ABC transporter related; phosphopantetheine- binding; condensation domain protein; KEGG: rer:RER_30610 non-ribosomal peptide synthetase; SMART: AAA ATPase. (3786 aa)
Tpau_4116PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rer:pREC1_0068 putative 3-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
Tpau_4117PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rer:pREC1_0069 acyl-CoA dehydrogenase. (386 aa)
Tpau_4122PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mab:MAB_4790 oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)
Tpau_4181PFAM: AMP-dependent synthetase and ligase; KEGG: msm:MSMEG_0131 acyl-CoA synthetase. (527 aa)
Tpau_4182TIGRFAM: acetyl-CoA acetyltransferase; KEGG: svi:Svir_30250 acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
Tpau_4183PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB. (729 aa)
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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