STRINGSTRING
Tpau_3554 Tpau_3554 Tpau_3555 Tpau_3555 Tpau_3556 Tpau_3556 Tpau_3557 Tpau_3557 Tpau_3558 Tpau_3558
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tpau_3554KEGG: msm:MSMEG_6800 putative fructose transport system kinase. (205 aa)
Tpau_3555PFAM: PfkB domain protein; KEGG: msm:MSMEG_6801 kinase, PfkB family protein. (284 aa)
Tpau_3556KEGG: msm:MSMEG_6802 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (260 aa)
Tpau_3557PFAM: inner-membrane translocator; KEGG: msm:MSMEG_6803 ribose transport system permease protein RbsC. (329 aa)
Tpau_3558PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msm:MSMEG_6804 sugar ABC transporter substrate-binding protein. (336 aa)
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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