(5 nodes) Transcription termination, and RNA polymerase network (Capnocytophaga ochracea)

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Your Input:
	nusG	NusG antitermination factor; Participates in transcription elongation, termination and antitermination. (183 aa)
	rpoB	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1269 aa)
	rpoC	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1428 aa)
	nusA	NusA antitermination factor; Participates in both transcription termination and antitermination. (410 aa)
	rho	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (549 aa)

Your Current Organism:

Capnocytophaga ochracea

NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
nusA	nusG	Coch_1262	Coch_0421	NusA antitermination factor; Participates in both transcription termination and antitermination.	NusG antitermination factor; Participates in transcription elongation, termination and antitermination.	0.957
nusA	rho	Coch_1262	Coch_1778	NusA antitermination factor; Participates in both transcription termination and antitermination.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.836
nusA	rpoB	Coch_1262	Coch_0426	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.985
nusA	rpoC	Coch_1262	Coch_0433	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.977
nusG	nusA	Coch_0421	Coch_1262	NusG antitermination factor; Participates in transcription elongation, termination and antitermination.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.957
nusG	rho	Coch_0421	Coch_1778	NusG antitermination factor; Participates in transcription elongation, termination and antitermination.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.773
nusG	rpoB	Coch_0421	Coch_0426	NusG antitermination factor; Participates in transcription elongation, termination and antitermination.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.981
nusG	rpoC	Coch_0421	Coch_0433	NusG antitermination factor; Participates in transcription elongation, termination and antitermination.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.955
rho	nusA	Coch_1778	Coch_1262	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.836
rho	nusG	Coch_1778	Coch_0421	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	NusG antitermination factor; Participates in transcription elongation, termination and antitermination.	0.773
rho	rpoB	Coch_1778	Coch_0426	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.858
rho	rpoC	Coch_1778	Coch_0433	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.818
rpoB	nusA	Coch_0426	Coch_1262	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.985
rpoB	nusG	Coch_0426	Coch_0421	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusG antitermination factor; Participates in transcription elongation, termination and antitermination.	0.981
rpoB	rho	Coch_0426	Coch_1778	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.858
rpoB	rpoC	Coch_0426	Coch_0433	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	nusA	Coch_0433	Coch_1262	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.977
rpoC	nusG	Coch_0433	Coch_0421	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusG antitermination factor; Participates in transcription elongation, termination and antitermination.	0.955
rpoC	rho	Coch_0433	Coch_1778	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.818
rpoC	rpoB	Coch_0433	Coch_0426	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999

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