STRINGSTRING
Athe_0990 Athe_0990 Athe_0992 Athe_0992 Athe_0993 Athe_0993 Athe_0994 Athe_0994 Athe_0995 Athe_0995
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Athe_0990SMART: AAA ATPase; KEGG: csc:Csac_2134 AAA ATPase. (313 aa)
Athe_0992TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein; KEGG: csc:Csac_2132 stage III sporulation AC family protein. (66 aa)
Athe_0993KEGG: csc:Csac_2131 hypothetical protein. (128 aa)
Athe_0994KEGG: csc:Csac_2130 hypothetical protein. (370 aa)
Athe_0995KEGG: csc:Csac_2129 hypothetical protein. (164 aa)
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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