STRINGSTRING
Athe_0112 Athe_0112 Athe_2602 Athe_2602 Athe_2363 Athe_2363 Athe_0240 Athe_0240 Athe_0242 Athe_0242 Athe_0243 Athe_0243 Athe_0432 Athe_0432 Athe_0656 Athe_0656 Athe_0657 Athe_0657 Athe_1074 Athe_1074 Athe_1524 Athe_1524 Athe_1563 Athe_1563 Athe_1755 Athe_1755 Athe_1916 Athe_1916 Athe_1917 Athe_1917 Athe_2280 Athe_2280
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Athe_0112KEGG: csc:Csac_2503 ABC-type Na+ efflux pump permease component-like protein. (403 aa)
Athe_2602PFAM: iron permease FTR1; KEGG: csc:Csac_0536 iron permease FTR1. (239 aa)
Athe_2363TIGRFAM: calcium-translocating P-type ATPase, PMCA-type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0369 calcium-translocating P-type ATPase, PMCA-type. (885 aa)
Athe_0240PFAM: cation transporter; KEGG: csc:Csac_0149 cation transporter. (503 aa)
Athe_0242PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: csc:Csac_0150 TrkA domain-containing protein. (221 aa)
Athe_0243PFAM: TrkA-N domain protein; KEGG: csc:Csac_0151 TrkA domain-containing protein. (206 aa)
Athe_0432Protein of unknown function DUF204; Probably functions as a manganese efflux pump. (208 aa)
Athe_0656PFAM: MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: csc:Csac_1222 MgtE intracellular region. (417 aa)
Athe_0657PFAM: natural resistance-associated macrophage protein; KEGG: csc:Csac_1223 natural resistance-associated macrophage protein. (415 aa)
Athe_1074PFAM: zinc/iron permease; KEGG: csc:Csac_1526 zinc/iron permease. (255 aa)
Athe_1524TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_2200 ATPase, P-type (transporting), HAD superfamily, subfamily IC. (849 aa)
Athe_1563Small GTP-binding protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (607 aa)
Athe_1755PFAM: natural resistance-associated macrophage protein; KEGG: csc:Csac_2300 natural resistance-associated macrophage protein. (404 aa)
Athe_1916PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1029 binding-protein-dependent transport systems inner membrane component. (325 aa)
Athe_1917PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1028 nickel-transporting ATPase. (306 aa)
Athe_2280TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0225 heavy metal translocating P-type ATPase. (818 aa)
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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