STRINGSTRING
Athe_1319 Athe_1319 Athe_2305 Athe_2305 Athe_1316 Athe_1316
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Athe_1319PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; KEGG: csc:Csac_1883 hypothetical protein. (463 aa)
Athe_2305PFAM: pyruvate carboxyltransferase; KEGG: csc:Csac_2485 hypothetical protein. (216 aa)
Athe_1316PFAM: carboxyl transferase; KEGG: csc:Csac_1881 carboxyl transferase. (514 aa)
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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