STRINGSTRING
Plim_0462 Plim_0462 Plim_0463 Plim_0463 Plim_1144 Plim_1144 Plim_1672 Plim_1672 Plim_1673 Plim_1673 Plim_1674 Plim_1674 Plim_1694 Plim_1694 fabH fabH Plim_2562 Plim_2562 Plim_2564 Plim_2564 Plim_2566 Plim_2566 Plim_2984 Plim_2984 Plim_3120 Plim_3120 Plim_3121 Plim_3121 Plim_3123 Plim_3123 Plim_3124 Plim_3124 Plim_3297 Plim_3297 Plim_3323 Plim_3323 Plim_3324 Plim_3324 Plim_3658 Plim_3658 Plim_3893 Plim_3893
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Plim_0462TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: Beta-ketoacyl synthase; KR domain protein; Acyl transferase; short-chain dehydrogenase/reductase SDR; KEGG: gur:Gura_2012 erythronolide synthase. (2414 aa)
Plim_0463TIGRFAM: PfaD family protein; PFAM: 2-nitropropane dioxygenase NPD; KEGG: glo:Glov_2266 PfaD family protein. (542 aa)
Plim_1144PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr5634 putative 3-oxoacyl-[acyl-carrier- protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (269 aa)
Plim_16726-deoxyerythronolide-B synthase., (Acyl-carrier- protein) S-malonyltransferase; PFAM: Beta-ketoacyl synthase; peptidase C45 acyl- coenzyme A:6-aminopenicillanic acid acyl-transferase; Acyl transferase; KR domain protein; short-chain dehydrogenase/reductase SDR; KEGG: acp:A2cp1_4042 beta-ketoacyl synthase. (3527 aa)
Plim_1673Hypothetical protein; KEGG: slo:Shew_2656 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (254 aa)
Plim_1674PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: lpp:lpp0423 enoyl-(acyl carrier protein) reductase. (254 aa)
Plim_1694PFAM: Beta-ketoacyl synthase; KEGG: ade:Adeh_2746 3-oxoacyl-[acyl-carrier- protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (430 aa)
fabH3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (424 aa)
Plim_2562Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (435 aa)
Plim_25643-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (412 aa)
Plim_2566Malonyl CoA-acyl carrier protein transacylase. (304 aa)
Plim_29844'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (282 aa)
Plim_31203-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (429 aa)
Plim_3121Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ. (162 aa)
Plim_31233-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (251 aa)
Plim_3124Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ. (167 aa)
Plim_3297Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ. (175 aa)
Plim_33233-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein. (387 aa)
Plim_3324Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (2275 aa)
Plim_3658Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (439 aa)
Plim_3893Short-chain dehydrogenase/reductase SDR. (273 aa)
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.