STRINGSTRING
rpsT rpsT rpmF rpmF rpmG rpmG rpmB rpmB rpmH rpmH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpsTRibosomal protein S20; Binds directly to 16S ribosomal RNA. (61 aa)
rpmFRibosomal protein L32; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1191; rpmF; Belongs to the bacterial ribosomal protein bL32 family. (57 aa)
rpmGRibosomal protein L33; KEGG: mmo:MMOB5490 0.0011 rpmG; 50S ribosomal protein L33 K02913; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3727; rpmG; Belongs to the bacterial ribosomal protein bL33 family. (55 aa)
rpmBRibosomal protein L28; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3728; rpmB; Belongs to the bacterial ribosomal protein bL28 family. (66 aa)
rpmHRibosomal protein L34; KEGG: rak:A1C_04775 2.3e-10 rpmH; 50S ribosomal protein L34 K02914; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3839; rpmH; Belongs to the bacterial ribosomal protein bL34 family. (46 aa)
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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