STRINGSTRING
tdcG tdcG fbp fbp pgi pgi glpX glpX tpiA tpiA pckA pckA sdaB sdaB EHY70772.1 EHY70772.1 ppsA ppsA gpmA gpmA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tdcGKEGG: sek:SSPA2901 4.0e-235 L-serine dehydratase; K01752 L-serine dehydratase; locus tag in AE006468 is STM3240; tdcG; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
fbpFructose-1,6-bisphosphatase; Locus tag in AE006468 is STM4415; fbp; Belongs to the FBPase class 1 family. (332 aa)
pgiGlucose-6-phosphate isomerase; Locus tag in AE006468 is STM4221; pgi; Belongs to the GPI family. (549 aa)
glpXFructose-1,6-bisphosphatase, class II; KEGG: stt:t3533 2.1e-167 glpX; fructose 1,6-bisphosphatase II K02446; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM4085; glpX. (325 aa)
tpiATriose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (255 aa)
pckAPhosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (539 aa)
sdaBKEGG: see:SNSL254_A3194 1.2e-240 L-serine ammonia-lyase K01752; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2971; sdaB; Belongs to the iron-sulfur dependent L-serine dehydratase family. (455 aa)
EHY70772.1L-serine ammonia-lyase; KEGG: spq:SPAB_01388 7.4e-243 hypothetical protein; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1826; sdaA. (454 aa)
ppsAPhosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (792 aa)
gpmAPhosphoglycerate mutase 1 family protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (250 aa)
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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