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| | EHY67714.1 | O-succinylhomoserine (thiol)-lyase; KEGG: sew:SeSA_A4317 3.7e-200 metB; cystathionine gamma-synthase K01739; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM4100; metB. (386 aa) |
| | EHY67562.1 | Transglycosylase SLT domain protein; Locus tag in AE006468 is STM4582; slt. (645 aa) |
| | deoC | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily. (271 aa) |
| | EHY67480.1 | Polysaccharide lyase family 8, super-sandwich domain protein. (785 aa) |
| | EHY67406.1 | Hypothetical protein; Locus tag in AE006468 is STM4447. (246 aa) |
| | ulaD | Orotidine 5'-phosphate decarboxylase / HUMPS family protein; Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization. Belongs to the HPS/KGPDC family. KGPDC subfamily. (216 aa) |
| | nnrE | YjeF protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of [...] (514 aa) |
| | psd | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (322 aa) |
| | aspA | Aspartate ammonia-lyase; Locus tag in AE006468 is STM4326; aspA. (478 aa) |
| | fumB | Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (548 aa) |
| | adi | Orn/Lys/Arg decarboxylase, major domain protein; Locus tag in AE006468 is STM4296; adi. (756 aa) |
| | nrfG | Tetratricopeptide repeat protein; Locus tag in AE006468 is STM4282; nrfG. (206 aa) |
| | EHY67201.1 | Hypothetical protein; KEGG: dae:Dtox_0608 0.00024 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; locus tag in AE006468 is STM4250; yjbQ. (171 aa) |
| | ubiC | Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway. (165 aa) |
| | EHY67155.1 | Isocitrate lyase; Locus tag in AE006468 is STM4184; aceA. (434 aa) |
| | hemE | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (354 aa) |
| | thiC | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. (631 aa) |
| | EHY67132.1 | Thiazole biosynthesis protein ThiH; Locus tag in AE006468 is STM4159; thiH. (377 aa) |
| | argH | Argininosuccinate lyase; KEGG: spq:SPAB_05108 3.8e-239 argininosuccinate lyase; K01755 argininosuccinate lyase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM4123; argH. (457 aa) |
| | ppc | Phosphoenolpyruvate carboxykinase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (883 aa) |
| | fsa | Fructose-6-phosphate aldolase; Catalyzes the reversible formation of fructose 6-phosphate from dihydroxyacetone and D-glyceraldehyde 3-phosphate via an aldolization reaction; Belongs to the transaldolase family. Type 3A subfamily. (220 aa) |
| | EHY67702.1 | Hydrolase, UxaA family; KEGG: seg:SG0653 1.3e-23 putative hydrolase N-terminus; K01685 altronate hydrolase. (68 aa) |
| | SBOV06021 | D-galactarate dehydratase / Altronate hydrolase; KEGG: sew:SeSA_A0810 1.2e-162 hydrolase, UxaA family; K01685 altronate hydrolase; Psort location: Cytoplasmic, score: 8.96. (387 aa) |
| | EHY67655.1 | KEGG: cko:CKO_03091 2.7e-44 hypothetical protein; K01714 dihydrodipicolinate synthase. (133 aa) |
| | rhaD | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. (274 aa) |
| | EHY67638.1 | Putative fructose-1,6-bisphosphate aldolase; KEGG: kpe:KPK_5486 4.5e-133 fructose-bisphosphate aldolase, class II family; K01624 fructose-bisphosphate aldolase, class II; Psort location: Cytoplasmic, score: 8.96. (280 aa) |
| | EHY67602.1 | Deoxyribose-phosphate aldolase; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family. (292 aa) |
| | fadB | Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (771 aa) |
| | ubiD | UbiD family decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis. (492 aa) |
| | cyaA | KEGG: ses:SARI_03713 0. cyaA; adenylate cyclase; K05851 adenylate cyclase, class 1; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3939; cyaA; Belongs to the adenylyl cyclase class-1 family. (848 aa) |
| | EHY68246.1 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (246 aa) |
| | EHY68234.1 | KEGG: seh:SeHA_C4251 1.1e-191 rfbB2; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3922; rffG; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (355 aa) |
| | EHY68223.1 | KEGG: reh:H16_B0810 6.2e-56 amidohydrolase family protein K07045; Psort location: Cytoplasmic, score: 8.96. (332 aa) |
| | ilvA | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (514 aa) |
| | ilvD | KEGG: seh:SeHA_C4235 0. ilvD; dihydroxy-acid dehydratase K01687; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3904; ilvD; Belongs to the IlvD/Edd family. (616 aa) |
| | ilvM | KEGG: sed:SeD_A4292 8.0e-40 ilvM; acetolactate synthase 2 regulatory subunit K11258; locus tag in AE006468 is STM3902; ilvM. (87 aa) |
| | EHY68127.1 | Heparinase II/III-like protein; KEGG: gfo:GFO_1151 5.4e-06 chondroitin AC/alginate lyase domain-containing protein K06036. (649 aa) |
| | EHY68126.1 | Hypothetical protein. (407 aa) |
| | EHY68067.1 | Hypothetical protein; KEGG: vfi:VF_2509 1.3e-53 2-dehydro-3-deoxyphosphogluconate aldolase; locus tag in AE006468 is STM3767. (247 aa) |
| | coaBC | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (407 aa) |
| | mutM | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (269 aa) |
| | mtlR | Mannitol repressor; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3687; mtlR. (196 aa) |
| | sgbH | Orotidine 5'-phosphate decarboxylase / HUMPS family protein; KEGG: set:SEN3497 6.9e-105 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03081; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3675; sgbH. (221 aa) |
| | pckA | Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (539 aa) |
| | aroB | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (342 aa) |
| | cobA | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. (457 aa) |
| | nanA | N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. (297 aa) |
| | elbB | DJ-1/PfpI family protein; Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate; Belongs to the peptidase C56 family. (217 aa) |
| | kbaY | Class II aldolase, tagatose bisphosphate family protein; KEGG: ses:SARI_04361 1.6e-144 kbaY; tagatose-bisphosphate aldolase; K08302 tagatose 1,6-diphosphate aldolase; Psort location: Cytoplasmic, score: 8.96. (290 aa) |
| | EHY68851.1 | Hypothetical protein; KEGG: ssn:SSON_3283 3.7e-06 yhaG; putative hydrolase; K01708 galactarate dehydratase. (61 aa) |
| | EHY68849.1 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (329 aa) |
| | pflB-2 | Formate acetyltransferase; KEGG: spq:SPAB_04044 0. hypothetical protein; K00656 formate C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3241; tdcE. (764 aa) |
| | tdcG | KEGG: sek:SSPA2901 4.0e-235 L-serine dehydratase; K01752 L-serine dehydratase; locus tag in AE006468 is STM3240; tdcG; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa) |
| | yhaM | Hypothetical protein; KEGG: hiq:CGSHiGG_07795 0.00068 hypothetical protein; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3238; yhaN; Belongs to the UPF0597 family. (436 aa) |
| | EHY68826.1 | D-galactarate dehydratase / Altronate hydrolase; KEGG: cko:CKO_04493 2.4e-244 hypothetical protein; K01685 altronate hydrolase; Psort location: Cytoplasmic, score: 8.96. (495 aa) |
| | ttdB | KEGG: cko:CKO_04452 3.4e-103 L(+)-tartrate dehydratase subunit beta; K03780 L(+)-tartrate dehydratase beta subunit; Psort location: Cytoplasmic, score: 8.96. (201 aa) |
| | EHY68803.1 | KEGG: cko:CKO_04451 1.6e-153 tartrate dehydratase subunit alpha; K03779 L(+)-tartrate dehydratase alpha subunit; Psort location: Cytoplasmic, score: 8.96. (302 aa) |
| | folB | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (119 aa) |
| | ribB | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (217 aa) |
| | metC | Cystathionine beta-lyase; KEGG: sea:SeAg_B3335 3.0e-207 metC; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3161; metC. (395 aa) |
| | uxuA | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (394 aa) |
| | EHY68707.1 | HpcH/HpaI aldolase/citrate lyase family protein; KEGG: ses:SARI_04511 4.6e-131 hypothetical protein; K01644 citrate lyase subunit beta; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3120; Belongs to the HpcH/HpaI aldolase family. (280 aa) |
| | EHY68706.1 | MaoC like domain protein; KEGG: nph:NP0916A 4.2e-34 fadB_4; enoyl-CoA hydratase II 4; locus tag in AE006468 is STM3119. (175 aa) |
| | EHY68676.1 | Orn/Lys/Arg decarboxylase, major domain protein; KEGG: sew:SeSA_A3289 0. speC; ornithine decarboxylase K01581; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3114; speC. (711 aa) |
| | mltC | Transglycosylase SLT domain protein; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. (361 aa) |
| | speA | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (632 aa) |
| | fba | Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (359 aa) |
| | lysA_1 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (420 aa) |
| | EHY68549.1 | Membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. (365 aa) |
| | fucA | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. (215 aa) |
| | sdaB | KEGG: see:SNSL254_A3194 1.2e-240 L-serine ammonia-lyase K01752; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2971; sdaB; Belongs to the iron-sulfur dependent L-serine dehydratase family. (455 aa) |
| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (432 aa) |
| | EHY68511.1 | Hypothetical protein; KEGG: sbo:SBO_2660 4.3e-32 eno; phosphopyruvate hydratase K01689; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM2952; eno. (75 aa) |
| | queE | Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (232 aa) |
| | queD | 6-pyruvoyl tetrahydropterin synthase/QueD family protein; KEGG: sty:STY3077 2.5e-43 putative 6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase; locus tag in AE006468 is STM2949; ptpS. (86 aa) |
| | ygbB | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (159 aa) |
| | bsdC | UbiD family decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. (475 aa) |
| | fucA_2 | Putative aldolase; KEGG: eci:UTI89_C3104 3.5e-94 ygbL; putative aldolase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2916; ygbL. (212 aa) |
| | hypE | Hydrogenase expression/formation protein HypE; Locus tag in AE006468 is STM2858; hypE. (336 aa) |
| | hycA | Putative formate hydrogenlyase regulatory protein; Locus tag in AE006468 is STM2853; hycA. (153 aa) |
| | hycC | Formate hydrogenlyase subunit 3; Locus tag in AE006468 is STM2851; hycC. (608 aa) |
| | hycD | NADH dehydrogenase; Locus tag in AE006468 is STM2850; hycD. (307 aa) |
| | EHY68401.1 | Formate hydrogenlyase maturation protein; Locus tag in AE006468 is STM2846; hycH. (136 aa) |
| | luxS | S-ribosylhomocysteinase LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. (171 aa) |
| | EHY68328.1 | Carbonate dehydratase; KEGG: sec:SCV48 8.4e-116 mig5; carbonic anhydrase chloroplast precursor; K01673 carbonic anhydrase. (246 aa) |
| | pheA | Chorismate mutase; KEGG: seg:SG2645 1.3e-199 pheA; bifunctional chorismate mutase/prephenate dehydratase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2667; pheA. (386 aa) |
| | murQ | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily. (297 aa) |
| | mltF | Transglycosylase SLT domain protein; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. (514 aa) |
| | cadA | Orn/Lys/Arg decarboxylase, major domain protein; KEGG: ses:SARI_00317 0. hypothetical protein; K01582 lysine decarboxylase; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2559; cadA. (714 aa) |
| | dapA | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (292 aa) |
| | EHY71550.1 | Malate dehydrogenase; KEGG: sew:SeSA_A2705 0. maeB; malic enzyme K00029; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2472; maeB. (759 aa) |
| | eutA | Ethanolamine utilization protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM2459; eutA. (467 aa) |
| | eutB | KEGG: sec:SC2455 2.9e-241 eutB; ethanolamine ammonia-lyase, heavy chain; K03735 ethanolamine ammonia-lyase large subunit; locus tag in AE006468 is STM2458; eutB. (453 aa) |
| | eutC | KEGG: set:SEN2437 2.9e-152 eutC; ethanolamine ammonia-lyase small subunit K03736; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2457; eutC; Belongs to the EutC family. (298 aa) |
| | cysM | Cysteine synthase B; KEGG: sea:SeAg_B2585 1.3e-151 cysM; cysteine synthase B K12339; locus tag in AE006468 is STM2440; cysM; Belongs to the cysteine synthase/cystathionine beta- synthase family. (303 aa) |
| | EHY71478.1 | Putative indolepyruvate decarboxylase; KEGG: see:SNSL254_A2597 2.6e-288 indole-3-pyruvate decarboxylase K04103; Psort location: CytoplasmicMembrane, score: 7.88; locus tag in AE006468 is STM2405. (550 aa) |
| | fadJ | Fatty oxidation complex, alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa) |
| | aroC | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (361 aa) |
| | EHY71427.1 | KEGG: sty:STY2590 5.5e-254 putative amino acid decarboxylase; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2360. (465 aa) |
| | menH | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). (252 aa) |
| | menB | Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). (285 aa) |
| | menC | O-succinylbenzoic acid synthetase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (320 aa) |
| | arnA | UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily. (660 aa) |
| | fbaB | Deoxyribose-phosphate aldolase; KEGG: spt:SPA0711 1.1e-184 fbaB; fructose-bisphosphate aldolase K01623; locus tag in AE006468 is STM2141; fbaB. (350 aa) |
| | gmd | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (373 aa) |
| | EHY71107.1 | KEGG: vvy:VV0355 1.5e-61 hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase; Psort location: Cytoplasmic, score: 9.26. (204 aa) |
| | EHY71106.1 | KEGG: gur:Gura_1692 2.6e-82 imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase HisF; Psort location: Cytoplasmic, score: 9.26. (262 aa) |
| | hisF | Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (258 aa) |
| | hisH | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (196 aa) |
| | hisB | Histidinol-phosphatase; KEGG: sea:SeAg_B2199 2.4e-189 hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2074; hisB; In the N-terminal section; belongs to the histidinol- phosphatase family. (355 aa) |
| | EHY71061.1 | Demethylmenaquinone methyltransferase; KEGG: rso:RS03177 2.2e-35 RSp1233; putative transferase protein K01043; Psort location: Cytoplasmic, score: 8.96. (222 aa) |
| | EHY71058.1 | HMGL-like protein; KEGG: plu:plu4081 7.2e-78 hypothetical protein; K01666 4-hydroxy 2-oxovalerate aldolase; Psort location: Cytoplasmic, score: 9.97. (313 aa) |
| | dcyD | D-cysteine desulfhydrase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. (328 aa) |
| | edd | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (603 aa) |
| | eda | KHG/KDPG aldolase; Locus tag in AE006468 is STM1884; eda. (213 aa) |
| | EHY70772.1 | L-serine ammonia-lyase; KEGG: spq:SPAB_01388 7.4e-243 hypothetical protein; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1826; sdaA. (454 aa) |
| | emtA | Transglycosylase SLT domain protein; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Preferentially cleaves at a distance of more than two disaccharide units from the ends of the glycan chain. (203 aa) |
| | EHY70691.1 | ChaC-like protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (229 aa) |
| | trpA | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (268 aa) |
| | trpB | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (397 aa) |
| | trpF | KEGG: spq:SPAB_01520 6.2e-230 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; K01609 indole-3-glycerol phosphate synthase K01817; locus tag in AE006468 is STM1725; trpC; Belongs to the TrpC family. (452 aa) |
| | trpD | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (531 aa) |
| | EHY70645.1 | KEGG: set:SEN1311 7.3e-275 trpE; anthranilate synthase component I; K01657 anthranilate synthase component I; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM1723; trpE. (520 aa) |
| | acnA | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (891 aa) |
| | pyrF | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (245 aa) |
| | EHY70532.1 | S-(hydroxymethyl)glutathione synthase; Locus tag in AE006468 is STM1643. (149 aa) |
| | EHY70442.1 | S-(hydroxymethyl)glutathione synthase; KEGG: xcb:XC_0776 0.0025 glutathione-dependent formaldehyde-activating enzyme; K03396 S-(hydroxymethyl)glutathione synthase; locus tag in AE006468 is STM1573. (146 aa) |
| | sfcA | Malic enzyme, NAD binding domain protein; KEGG: ses:SARI_01403 3.5e-291 malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating); Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1566; sfcA. (546 aa) |
| | fumC | Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (467 aa) |
| | EHY70332.1 | Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (525 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (211 aa) |
| | gloA | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. (135 aa) |
| | fumD | Hypothetical protein; Locus tag in AE006468 is STM1388; orf70. (70 aa) |
| | sufS | Cysteine desulfurase/selenocysteine lyase; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L- selenocysteine. Selenocysteine lyase activity is however unsure in vivo. (406 aa) |
| | aroD | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. (233 aa) |
| | EHY70073.1 | Adenylosuccinate lyase; KEGG: stm:STM1232 5.2e-242 purB; adenylosuccinate lyase K01756; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1232; purB. (456 aa) |
| | mltG | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (340 aa) |
| | pabC | Aminodeoxychorismate lyase; KEGG: sew:SeSA_A1274 1.0e-110 pabC; 4-amino-4-deoxychorismate lyase K02619; locus tag in AE006468 is STM1198; pabC. (269 aa) |
| | hpaI | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Catalyzes the reversible retro-aldol cleavage of 4-hydroxy-2- ketoheptane-1,7-dioate (HKHD) to pyruvate and succinic semialdehyde. (263 aa) |
| | hpaH | KEGG: sew:SeSA_A1169 3.9e-141 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1105; hpaH. (267 aa) |
| | EHY69914.1 | KEGG: bxe:Bxe_A3826 7.1e-135 glutamate decarboxylase K01580; Psort location: Cytoplasmic, score: 9.26; Belongs to the group II decarboxylase family. (447 aa) |
| | mgsA | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (152 aa) |
| | fabA | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (172 aa) |
| | pflB | Formate acetyltransferase; KEGG: spq:SPAB_02545 0. hypothetical protein; K00656 formate C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0973; pflB. (760 aa) |
| | pflA | Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (277 aa) |
| | EHY69810.1 | Glycine hydroxymethyltransferase; KEGG: see:SNSL254_A0969 3.9e-173 ltaE; low-specificity L-threonine aldolase K01620; locus tag in AE006468 is STM0934; ltaA. (333 aa) |
| | EHY69755.1 | Hypothetical protein. (87 aa) |
| | EHY69740.1 | Glycyl-radical enzyme activating family protein; KEGG: seg:SG0825 7.1e-158 pflE; putative pyruvate formate-lyase 3 activating enzyme K04069; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0844; pflE. (299 aa) |
| | moaC | Molybdenum cofactor biosynthesis protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (161 aa) |
| | moaA | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (329 aa) |
| | hutH | KEGG: stm:STM0791 3.2e-258 hutH; histidine ammonia-lyase K01745; locus tag in AE006468 is STM0791; hutH. (506 aa) |
| | hutU | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (561 aa) |
| | nei | Zinc finger found in FPG and IleRS; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized pyrimidines, such as thymine glycol, 5,6-dihydrouracil and 5,6-dihydrothymine. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (303 aa) |
| | EHY69609.1 | FAD binding domain of DNA photolyase; KEGG: spq:SPAB_02826 2.2e-257 deoxyribodipyrimidine photolyase; K01669 deoxyribodipyrimidine photo-lyase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0709; phrB; Belongs to the DNA photolyase family. (508 aa) |
| | speF | Orn/Lys/Arg decarboxylase, major domain protein; KEGG: stm:STM0701 0. speF; ornithine decarboxylase K01581; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0701; speF. (732 aa) |
| | rlpA | Sporulation and cell division repeat protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (367 aa) |
| | citC | [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase. (358 aa) |
| | EHY69533.1 | KEGG: see:SNSL254_A0676 1.0e-151 citE; citrate (pro-3S)-lyase, beta subunit K01644; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0622; citE; Belongs to the HpcH/HpaI aldolase family. (302 aa) |
| | citF | KEGG: sew:SeSA_A0780 9.5e-266 citF; citrate lyase, alpha subunit K01643; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0621; citF. (509 aa) |
| | EHY69528.1 | Ribonuclease I(RNase I) family protein; KEGG: sea:SeAg_B0657 1.1e-136 ribonuclease I K01169; Psort location: Periplasmic, score: 10.00; locus tag in AE006468 is STM0617; rna; Belongs to the RNase T2 family. (268 aa) |
| | EHY69470.1 | Polysaccharide lyase family 8, super-sandwich domain protein; Broad-specificity glycosaminoglycan lyase. (1061 aa) |
| | purE | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (169 aa) |
| | purK | Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (341 aa) |
| | ybaK | YbaK/ebsC protein; KEGG: ent:Ent638_0960 2.3e-72 hypothetical protein; locus tag in AE006468 is STM0495; ybaK; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (159 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (320 aa) |
| | EHY69381.1 | Pyridoxal-phosphate dependent enzyme; KEGG: set:SEN0440 3.4e-190 putative lyase; K01738 cysteine synthase A; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0458. (351 aa) |
| | hemB | Porphobilinogen synthase; KEGG: ses:SARI_02553 4.8e-168 delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0372; hemB; Belongs to the ALAD family. (324 aa) |
| | prpD | KEGG: see:SNSL254_A0410 3.4e-254 prpD; 2-methylcitrate dehydratase K01720; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0370; prpD. (483 aa) |
| | prpB | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (294 aa) |
| | EHY69255.1 | Transglycosylase SLT domain protein; KEGG: spt:SPA2509 1.7e-213 mltD; membrane-bound lytic murein transglycosylase D; K08307 membrane-bound lytic murein transglycosylase D; locus tag in AE006468 is STM0260; dniR. (406 aa) |
| | EHY69201.1 | Glyoxalase family protein; KEGG: chu:CHU_2533 4.0e-45 gloA; lactoylglutathione lyase K08234; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0235; yaeR. (129 aa) |
| | ldcC | Orn/Lys/Arg decarboxylase, major domain protein; KEGG: sea:SeAg_B0275 0. lysine decarboxylase, constitutive K01582; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0234; ldcC. (713 aa) |
| | fabZ | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (151 aa) |
| | panD | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (126 aa) |
| | yadF | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (220 aa) |
| | speD | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily. (264 aa) |
| | acnB | Aconitate hydratase 2; KEGG: ses:SARI_02835 0. bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; K01682 aconitate hydratase 2; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0158; acnB; Belongs to the aconitase/IPM isomerase family. (839 aa) |
| | leuC | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (466 aa) |
| | leuD | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (201 aa) |
| | caiD | carnitinyl-CoA dehydratase; Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. (261 aa) |
| | EHY68979.1 | Threonine synthase; KEGG: sed:SeD_A0004 1.2e-224 thrC; threonine synthase K01733; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0004; thrC. (428 aa) |
