STRINGSTRING
sdhB sdhB frdD frdD frdC frdC sdhC sdhC frdA frdA frdB frdB sdhA sdhA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sdhBKEGG: spt:SPA2008 2.0e-130 sdhB; succinate dehydrogenase iron-sulfur subunit K00240; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM0735; sdhB; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (239 aa)
frdDFumarate reductase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (119 aa)
frdCFumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (131 aa)
sdhCKEGG: sed:SeD_A0826 6.5e-45 sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit; K00241 succinate dehydrogenase cytochrome b-556 subunit; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0732; sdhC. (95 aa)
frdAFumarate reductase, flavoprotein subunit; Locus tag in AE006468 is STM4343; frdA. (596 aa)
frdBSuccinate dehydrogenase and fumarate reductase iron-sulfur protein; Locus tag in AE006468 is STM4342; frdB; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (244 aa)
sdhAKEGG: spt:SPA2009 0. sdhA; succinate dehydrogenase flavoprotein subunit K00239; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0734; sdhA; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa)
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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