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AKB12327.1 AKB12327.1 AKB12391.1 AKB12391.1 AKB12946.1 AKB12946.1 AKB13061.1 AKB13061.1 AKB13240.1 AKB13240.1 AKB13241.1 AKB13241.1 AKB13442.1 AKB13442.1 AKB13461.1 AKB13461.1 AKB13467.1 AKB13467.1 AKB13472.1 AKB13472.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKB12327.1Hypothetical protein. (543 aa)
AKB12391.1Hypothetical protein. (599 aa)
AKB12946.1Cell surface protein. (695 aa)
AKB13061.1Polysaccharide deacetylase. (247 aa)
AKB13240.1Alpha-amylase. (367 aa)
AKB13241.1Alpha-amylase. (398 aa)
AKB13442.1Hypothetical protein. (353 aa)
AKB13461.1Hypothetical protein. (341 aa)
AKB13467.1Hypothetical protein. (380 aa)
AKB13472.1Polysaccharide deacetylase. (299 aa)
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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