STRINGSTRING
AKB12140.1 AKB12140.1 AKB12519.1 AKB12519.1 AKB12618.1 AKB12618.1 AKB12619.1 AKB12619.1 AKB12620.1 AKB12620.1 AKB12621.1 AKB12621.1 AKB13248.1 AKB13248.1 AKB13249.1 AKB13249.1 AKB13600.1 AKB13600.1 AKB13601.1 AKB13601.1 AKB13602.1 AKB13602.1 AKB13603.1 AKB13603.1 AKB13740.1 AKB13740.1 AKB14013.1 AKB14013.1 AKB14110.1 AKB14110.1 AKB14111.1 AKB14111.1 AKB14275.1 AKB14275.1 AKB14283.1 AKB14283.1 AKB14284.1 AKB14284.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKB12140.14-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (467 aa)
AKB12519.1Pyruvate:ferredoxin oxidoreductase, beta subunit. (296 aa)
AKB12618.1Succinate-semialdehyde dehydrogenase [NADP+]. (454 aa)
AKB12619.1Acetolactate synthase; Belongs to the TPP enzyme family. (544 aa)
AKB12620.1Succinate dehydrogenase flavoprotein subunit. (601 aa)
AKB12621.1Succinate dehydrogenase iron-sulfur protein. (258 aa)
AKB13248.1Beta-ketoacyl synthase/thiolase. (390 aa)
AKB13249.1Hydroxymethylglutaryl-CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family. (349 aa)
AKB13600.1Pyruvate:ferredoxin oxidoreductase, beta subunit. (296 aa)
AKB13601.1Pyruvate:ferredoxin oxidoreductase, alpha subunit. (402 aa)
AKB13602.1Pyruvate:ferredoxin oxidoreductase, delta subunit. (111 aa)
AKB13603.1Pyruvate:ferredoxin oxidoreductase, gamma subunit. (182 aa)
AKB13740.13-isopropylmalate dehydrogenase. (375 aa)
AKB14013.1Succinate-semialdehyde dehydrogenase [NADP+]. (411 aa)
AKB14110.1Acetolactate synthase large subunit. (587 aa)
AKB14111.1Acetolactate synthase small subunit. (161 aa)
AKB14275.1Succinate-semialdehyde dehydrogenase [NADP+]. (454 aa)
AKB14283.12-oxoglutarate oxidoreductase, beta subunit. (283 aa)
AKB14284.12-oxoglutarate oxidoreductase, alpha subunit. (579 aa)
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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