STRINGSTRING
OCC_13740 OCC_13740 nadE nadE OCC_12356 OCC_12356 OCC_11884 OCC_11884 cheD cheD cheB cheB OCC_10209 OCC_10209 OCC_10179 OCC_10179 OCC_09114 OCC_09114 OCC_08070 OCC_08070 pyrG pyrG pdxT pdxT OCC_04817 OCC_04817 cobB cobB gatD gatD OCC_02432 OCC_02432 OCC_02457 OCC_02457 OCC_03382 OCC_03382 OCC_14540 OCC_14540 OCC_14535 OCC_14535 OCC_13800 OCC_13800 OCC_13795 OCC_13795 OCC_13750 OCC_13750
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OCC_13740Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (123 aa)
nadENAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. (254 aa)
OCC_12356Asparaginase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (305 aa)
OCC_11884Peptidase C26; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (242 aa)
cheDChemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (164 aa)
cheBChemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (353 aa)
OCC_10209Asparaginase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (345 aa)
OCC_10179Pyrazinamidase/nicotinamidase pxnc; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (181 aa)
OCC_09114Apolipoprotein N- acyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (264 aa)
OCC_08070Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (221 aa)
pyrGCTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (531 aa)
pdxTGlutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (197 aa)
OCC_04817Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa)
cobBNAD-dependent protein deacylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sirtuin family. Class III subfamily. (255 aa)
gatDglutamyl-tRNA(Gln) amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (439 aa)
OCC_02432Cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (187 aa)
OCC_02457Amidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa)
OCC_03382Acetamidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (433 aa)
OCC_14540Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (219 aa)
OCC_14535Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (79 aa)
OCC_13800Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (87 aa)
OCC_13795Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (121 aa)
OCC_13750Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (156 aa)
Your Current Organism:
Thermococcus litoralis
NCBI taxonomy Id: 523849
Other names: T. litoralis DSM 5473, Thermococcus litoralis ATCC 51850, Thermococcus litoralis DSM 5473, Thermococcus litoralis JCM 8560, Thermococcus litoralis NS-C, Thermococcus litoralis str. DSM 5473, Thermococcus litoralis strain DSM 5473
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