STRINGSTRING
OCC_00232 OCC_00232 OCC_01129 OCC_01129 dtdA dtdA OCC_02432 OCC_02432 gcvT gcvT pdaD pdaD OCC_03928 OCC_03928 OCC_03978 OCC_03978 OCC_04033 OCC_04033 OCC_04038 OCC_04038 tdh tdh pdxT pdxT OCC_05384 OCC_05384 OCC_05906 OCC_05906 OCC_05911 OCC_05911 OCC_06601 OCC_06601 gcvPB gcvPB gcvPA gcvPA OCC_09309 OCC_09309 gcvH gcvH OCC_09781 OCC_09781 OCC_10319 OCC_10319 OCC_10324 OCC_10324 OCC_10644 OCC_10644 OCC_10960 OCC_10960 OCC_11080 OCC_11080 OCC_11177 OCC_11177 OCC_11567 OCC_11567 OCC_13350 OCC_13350 OCC_13355 OCC_13355 OCC_13360 OCC_13360
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OCC_00232Carbamate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the carbamate kinase family. (315 aa)
OCC_01129Coenzyme F390 synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (425 aa)
dtdAD-tyrosyl-tRNA(Tyr) deacylase; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo. (272 aa)
OCC_02432Cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (187 aa)
gcvTGlycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. (397 aa)
pdaDPyruvoyl-dependent arginine decarboxylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the PdaD family. (158 aa)
OCC_03928Peptidase M20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (389 aa)
OCC_03978Amidohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (464 aa)
OCC_04033Amidohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (116 aa)
OCC_04038Amidohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (240 aa)
tdhL-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (350 aa)
pdxTGlutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (197 aa)
OCC_05384methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (144 aa)
OCC_05906Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (49 aa)
OCC_05911Amidohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (453 aa)
OCC_06601Nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. (276 aa)
gcvPBGlycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. (499 aa)
gcvPAGlycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (451 aa)
OCC_093092-keto acid:ferredoxin oxidoreductase subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (627 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (134 aa)
OCC_09781Peptidase M20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (380 aa)
OCC_10319Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0107 family. (130 aa)
OCC_10324Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (386 aa)
OCC_10644Acylpyruvase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (225 aa)
OCC_10960Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (319 aa)
OCC_11080acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (385 aa)
OCC_11177Phosphopantothenoylcysteine decarboxylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (405 aa)
OCC_11567Indolepyruvate oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (646 aa)
OCC_13350Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (81 aa)
OCC_13355Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (99 aa)
OCC_13360Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (129 aa)
Your Current Organism:
Thermococcus litoralis
NCBI taxonomy Id: 523849
Other names: T. litoralis DSM 5473, Thermococcus litoralis ATCC 51850, Thermococcus litoralis DSM 5473, Thermococcus litoralis JCM 8560, Thermococcus litoralis NS-C, Thermococcus litoralis str. DSM 5473, Thermococcus litoralis strain DSM 5473
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