STRINGSTRING
EFK59205.1 EFK59205.1 secG secG EFK59790.1 EFK59790.1 EFK59794.1 EFK59794.1 gspF gspF EFK58283.1 EFK58283.1 EFK58426.1 EFK58426.1 gspD gspD gspG gspG EFK57222.1 EFK57222.1 secE secE EFK57536.1 EFK57536.1 EFK57747.1 EFK57747.1 EFK56956.1 EFK56956.1 EFK55823.1 EFK55823.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EFK59205.1Hypothetical protein; Pfam: PF04357. (1452 aa)
secGPreprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (123 aa)
EFK59790.1S23 ribosomal protein; Pfam: PF05635; InterPro: IPR008815. (91 aa)
EFK59794.1S23 ribosomal protein; Pfam: PF05635; InterPro: IPR008815. (117 aa)
gspFBacterial type II secretion system domain protein F; COG: COG1459; Pfam: PF00482; InterPro: IPR001992. (384 aa)
EFK58283.1Hypothetical protein. (288 aa)
EFK58426.1Hypothetical protein. (319 aa)
gspDSecretin and TonB N terminus short domain protein; Pfam: PF07660,PF00263; InterPro: IPR004846; Belongs to the bacterial secretin family. (624 aa)
gspGPrepilin-type cleavage/methylation N-terminal domain protein; Pfam: PF07963. (138 aa)
EFK57222.1Outer membrane protein, OMP85 family; Pfam: PF01103. (387 aa)
secEPreprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (64 aa)
EFK57536.1TraG family protein. (667 aa)
EFK57747.1Hypothetical protein; Pfam: PF05170. (1765 aa)
EFK56956.1TraG family protein. (666 aa)
EFK55823.1Outer membrane protein, OMP85 family; Pfam: PF00149,PF01103. (1206 aa)
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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