STRINGSTRING
EFK58059.1 EFK58059.1 EFK56009.1 EFK56009.1 EFK56669.1 EFK56669.1 EFK57019.1 EFK57019.1 ompH ompH EFK58851.1 EFK58851.1 EFK58414.1 EFK58414.1 ftsY ftsY yfiO yfiO yidC yidC EFK59178.1 EFK59178.1 EFK55746.1 EFK55746.1 EFK55743.1 EFK55743.1 EFK57908.1 EFK57908.1 EFK57746.1 EFK57746.1 EFK57696.1 EFK57696.1 ffh ffh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EFK58059.1Hypothetical protein. (433 aa)
EFK56009.1Outer membrane protein; Pfam: PF03938; InterPro: IPR005632. (169 aa)
EFK56669.1PQQ enzyme repeat protein. (390 aa)
EFK57019.1PQQ enzyme repeat protein; Pfam: PF00149,PF01011; InterPro: IPR011047. (795 aa)
ompHOuter membrane protein; Pfam: PF03938; InterPro: IPR005632. (177 aa)
EFK58851.1Outer membrane protein; Pfam: PF03938; InterPro: IPR005632. (190 aa)
EFK58414.1PQQ enzyme repeat protein; Pfam: PF00149,PF01011; InterPro: IPR011047. (627 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (324 aa)
yfiOOuter membrane assembly lipoprotein YfiO. (304 aa)
yidCMembrane protein insertase, YidC/Oxa1 family domain protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (607 aa)
EFK59178.1Hypothetical protein. (484 aa)
EFK55746.1Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. (84 aa)
EFK55743.1Outer membrane protein; Pfam: PF03938; InterPro: IPR005632. (208 aa)
EFK57908.1Hypothetical protein. (454 aa)
EFK57746.1Outer membrane protein, OMP85 family; Pfam: PF01103; InterPro: IPR000184. (778 aa)
EFK57696.1Outer membrane protein, OMP85 family; Pfam: PF07244,PF01103; InterPro: IPR000184. (782 aa)
ffhSignal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (445 aa)
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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