STRINGSTRING
EFK59331.1 EFK59331.1 cox cox EFK59335.1 EFK59335.1 coxN coxN EFK59339.1 EFK59339.1 EFK59664.1 EFK59664.1 atpD atpD atpC atpC EFK58604.1 EFK58604.1 ccoN ccoN EFK58246.1 EFK58246.1 EFK58007.1 EFK58007.1 atpB atpB atpE atpE atpF atpF atpH atpH atpA atpA atpG atpG EFK56709.1 EFK56709.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EFK59331.1Hypothetical protein; COG: COG2322; Pfam: PF04238; InterPro: IPR007352. (181 aa)
coxCytochrome c oxidase, subunit III; COG: COG1845; Pfam: PF00510; InterPro: IPR000298. (244 aa)
EFK59335.1Cytochrome c oxidase, subunit III; Pfam: PF00510. (198 aa)
coxNCytochrome C and quinol oxidase polypeptide I; COG: COG0843; Pfam: PF00115; InterPro: IPR000883; Belongs to the heme-copper respiratory oxidase family. (595 aa)
EFK59339.1Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (431 aa)
EFK59664.1SusD family protein; Pfam: PF07980; InterPro: IPR012944. (523 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (500 aa)
atpCATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Pfam: PF02823; InterPro: IPR001469. (82 aa)
EFK58604.1SusD family protein; Pfam: PF07980; InterPro: IPR012944. (504 aa)
ccoNCytochrome c oxidase, cbb3-type, subunit I; COG: COG3278; Pfam: PF00115,PF02433; InterPro: IPR004677; Belongs to the heme-copper respiratory oxidase family. (714 aa)
EFK58246.1SusD family protein; Pfam: PF07980; InterPro: IPR012944. (544 aa)
EFK58007.1WbqC-like protein; Pfam: PF08889; InterPro: IPR014985. (203 aa)
atpBATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (361 aa)
atpEATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (63 aa)
atpFATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (166 aa)
atpHATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (181 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (524 aa)
atpGATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (297 aa)
EFK56709.1SusD family protein; Pfam: PF07980; InterPro: IPR012944. (461 aa)
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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