STRINGSTRING
Dbac_0813 Dbac_0813 Dbac_0814 Dbac_0814 Dbac_0815 Dbac_0815 Dbac_0816 Dbac_0816 Dbac_0818 Dbac_0818 Dbac_0819 Dbac_0819 Dbac_0826 Dbac_0826
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dbac_0813TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: dde:Dde_3328 alkylphosphonate utilization protein PhnG. (149 aa)
Dbac_0814TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: mrd:Mrad2831_3856 phosphonate C-P lyase system protein PhnH. (201 aa)
Dbac_0815PFAM: phosphonate metabolism; KEGG: rpc:RPC_1284 phosphonate metabolism. (371 aa)
Dbac_0816Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (284 aa)
Dbac_0818KEGG: mlo:mlr9286 PhnL, phosphonates transport ATP- binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase. (230 aa)
Dbac_0819TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; amidohydrolase; KEGG: dde:Dde_3334 amidohydrolase-like. (380 aa)
Dbac_0826TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; amidohydrolase; KEGG: dde:Dde_3334 amidohydrolase-like. (378 aa)
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.