STRINGSTRING
Sdel_0865 Sdel_0865 Sdel_0866 Sdel_0866 Sdel_0868 Sdel_0868 minE minE Sdel_0870 Sdel_0870 Sdel_0871 Sdel_0871 Sdel_0872 Sdel_0872 Sdel_0873 Sdel_0873 Sdel_0874 Sdel_0874 Sdel_0876 Sdel_0876 Sdel_1706 Sdel_1706
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0865PFAM: ribonuclease II; Ribonuclease B OB region domain; KEGG: nis:NIS_1162 ribonuclease. (648 aa)
Sdel_0866PFAM: Metal-dependent hydrolase HDOD; KEGG: ccv:CCV52592_1582 thiamine-phosphate kinase. (270 aa)
Sdel_0868TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nam:NAMH_1151 septum site-determining protein MinD. (269 aa)
minECell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. (79 aa)
Sdel_0870PFAM: protein of unknown function DUF610 YibQ; KEGG: nam:NAMH_1153 putative periplasmic protein. (381 aa)
Sdel_0871PFAM: SMF family protein; KEGG: sun:SUN_0445 DNA processing protein A. (256 aa)
Sdel_0872PFAM: protein of unknown function DUF81; KEGG: pin:Ping_3677 hypothetical protein. (267 aa)
Sdel_0873Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (135 aa)
Sdel_0874PFAM: protein of unknown function UPF0126; KEGG: abu:Abu_2332 hypothetical protein. (202 aa)
Sdel_0876KEGG: tdn:Suden_1252 hypothetical protein. (341 aa)
Sdel_1706ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (375 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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