STRINGSTRING
Sdel_0517 Sdel_0517 Sdel_0518 Sdel_0518 Sdel_0519 Sdel_0519 Sdel_0520 Sdel_0520 pal pal Sdel_0522 Sdel_0522
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0517PFAM: MotA/TolQ/ExbB proton channel; KEGG: cff:CFF8240_1523 ExbB/TolQ family transport protein. (195 aa)
Sdel_0518PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cff:CFF8240_1522 ExbD/TolR family transport protein. (130 aa)
Sdel_0519Hypothetical protein; KEGG: cco:CCC13826_0921 putative periplasmic protein. (258 aa)
Sdel_0520PFAM: TolB domain protein; KEGG: ccv:CCV52592_1743 translocation protein TolB. (422 aa)
palOmpA/MotB domain protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (166 aa)
Sdel_0522PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: cjd:JJD26997_0121 hypothetical protein. (306 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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