STRINGSTRING
Sdel_0117 Sdel_0117 Sdel_0118 Sdel_0118 Sdel_0129 Sdel_0129 Sdel_0130 Sdel_0130 Sdel_0131 Sdel_0131 Sdel_0132 Sdel_0132 Sdel_0133 Sdel_0133 nfo nfo Sdel_0135 Sdel_0135 Sdel_0136 Sdel_0136 Sdel_0138 Sdel_0138 nuoB nuoB nuoC nuoC nuoD nuoD Sdel_0142 Sdel_0142 Sdel_0143 Sdel_0143 Sdel_0144 Sdel_0144 nuoH nuoH nuoI nuoI Sdel_0147 Sdel_0147 nuoK nuoK Sdel_0149 Sdel_0149 Sdel_0150 Sdel_0150 nuoN nuoN Sdel_0152 Sdel_0152 Sdel_0224 Sdel_0224 Sdel_0233 Sdel_0233 Sdel_0740 Sdel_0740 Sdel_0741 Sdel_0741 Sdel_0742 Sdel_0742 Sdel_0851 Sdel_0851 Sdel_1057 Sdel_1057 mltG mltG Sdel_1091 Sdel_1091 Sdel_1183 Sdel_1183 Sdel_1191 Sdel_1191 Sdel_1192 Sdel_1192 Sdel_1193 Sdel_1193 Sdel_1194 Sdel_1194 Sdel_1195 Sdel_1195 Sdel_1196 Sdel_1196 Sdel_1197 Sdel_1197 Sdel_1198 Sdel_1198 hypA-2 hypA-2 Sdel_1223 Sdel_1223 Sdel_1261 Sdel_1261 Sdel_1262 Sdel_1262 Sdel_1263 Sdel_1263 Sdel_1264 Sdel_1264 Sdel_1266 Sdel_1266 xerH xerH Sdel_1269 Sdel_1269 Sdel_1457 Sdel_1457 Sdel_1831 Sdel_1831 Sdel_1832 Sdel_1832 Sdel_1833 Sdel_1833 Sdel_1861 Sdel_1861 Sdel_1862 Sdel_1862 Sdel_1863 Sdel_1863 Sdel_1864 Sdel_1864 Sdel_1865 Sdel_1865 Sdel_1866 Sdel_1866 Sdel_1867 Sdel_1867 Sdel_1868 Sdel_1868 Sdel_1869 Sdel_1869 Sdel_1870 Sdel_1870 Sdel_2084 Sdel_2084 Sdel_2085 Sdel_2085 Sdel_2086 Sdel_2086 Sdel_2087 Sdel_2087 Sdel_2088 Sdel_2088 Sdel_2089 Sdel_2089 Sdel_2090 Sdel_2090
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0117Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (386 aa)
Sdel_0118PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: cjd:JJD26997_0543 ubiquinol--cytochrome c reductase, iron-sulfur subunit. (166 aa)
Sdel_0129PFAM: ABC-3 protein; transport system permease protein; KEGG: ccv:CCV52592_0098 cation ABC transporter, permease protein. (269 aa)
Sdel_0130PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cco:CCC13826_1791 ATP-dependent DNA helicase PcrA. (253 aa)
Sdel_0131PFAM: periplasmic solute binding protein; KEGG: abu:Abu_1739 putative cation ABC transporter, periplasmic-binding protein; Belongs to the bacterial solute-binding protein 9 family. (285 aa)
Sdel_0132PFAM: ferric-uptake regulator; KEGG: abu:Abu_1740 FUR family transcriptional regulator; Belongs to the Fur family. (123 aa)
Sdel_0133KEGG: cff:CFF8240_1671 hypothetical protein. (161 aa)
nfoApurinic endonuclease Apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (280 aa)
Sdel_0135PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: wsu:WS0236 hypothetical protein. (405 aa)
Sdel_0136PFAM: AMP-dependent synthetase and ligase; KEGG: cff:CFF8240_1668 acyl-CoA synthetase. (520 aa)
Sdel_0138NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. (132 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (169 aa)
nuoCNADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (266 aa)
nuoDNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (408 aa)
Sdel_0142KEGG: sun:SUN_2228 hypothetical protein. (79 aa)
Sdel_0143KEGG: abu:Abu_2232 hypothetical protein. (277 aa)
Sdel_0144PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron- sulfur binding domain protein; KEGG: nis:NIS_0295 NADH dehydrogenase subunit G. (825 aa)
nuoHNADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (330 aa)
nuoINADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (204 aa)
Sdel_0147NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (184 aa)
nuoKNADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (100 aa)
Sdel_0149TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: nis:NIS_0300 NADH dehydrogenase subunit L. (618 aa)
Sdel_0150TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sun:SUN_2219 NADH dehydrogenase subunit M. (508 aa)
nuoNProton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (494 aa)
Sdel_0152KEGG: cff:CFF8240_0217 TPR repeat-containing protein. (797 aa)
Sdel_0224PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cha:CHAB381_1487 ferredoxin, 4Fe-4S. (94 aa)
Sdel_0233PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nis:NIS_0409 4Fe-4S ferredoxin. (83 aa)
Sdel_0740Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (166 aa)
Sdel_0741Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (418 aa)
Sdel_0742KEGG: cco:CCC13826_1919 cytochrome c subfamily protein. (288 aa)
Sdel_0851PFAM: peptidase M16 domain protein; KEGG: tdn:Suden_0405 peptidase M16-like. (432 aa)
Sdel_1057PFAM: peptidase M16 domain protein; KEGG: abu:Abu_0875 putative zinc protease; Belongs to the peptidase M16 family. (434 aa)
mltGAminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (282 aa)
Sdel_1091KEGG: ccv:CCV52592_1887 hypothetical protein. (853 aa)
Sdel_1183KEGG: cla:Cla_0404 hypothetical protein. (225 aa)
Sdel_1191TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: nis:NIS_1695 hypothetical protein. (207 aa)
Sdel_1192KEGG: cju:C8J_0083 putative lipoprotein. (137 aa)
Sdel_1193KEGG: nis:NIS_1693 hypothetical protein. (457 aa)
Sdel_1194PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: nam:NAMH_1060 hydrogenase-4 component I. (138 aa)
Sdel_1195PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nam:NAMH_1059 carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit. (139 aa)
Sdel_1196PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: nam:NAMH_1058 carbon monoxide-induced hydrogenase, CooU subunit. (164 aa)
Sdel_1197NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: nam:NAMH_1057 carbon monoxide-induced hydrogenase, large subunit. (362 aa)
Sdel_1198PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nam:NAMH_1056 iron-sulfur cluster-binding protein CooF. (154 aa)
hypA-2Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (115 aa)
Sdel_1223PFAM: peptidase M16 domain protein; KEGG: dde:Dde_0444 M16 family peptidase putative; Belongs to the peptidase M16 family. (950 aa)
Sdel_1261KEGG: abu:Abu_1129 hypothetical protein. (170 aa)
Sdel_1262PFAM: AAA ATPase central domain protein; peptidase M41; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ccv:CCV52592_1068 putative cell division protease FtsH-like protein; Belongs to the AAA ATPase family. (553 aa)
Sdel_1263KEGG: nis:NIS_1081 tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (414 aa)
Sdel_1264PFAM: MscS Mechanosensitive ion channel; KEGG: ccv:CCV52592_1066 mechanosensitive ion channel family protein. (536 aa)
Sdel_1266PFAM: TrkA-C domain protein; KEGG: cff:CFF8240_0979 TrkA domain-containing protein. (470 aa)
xerHIntegrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Belongs to the 'phage' integrase family. XerH subfamily. (353 aa)
Sdel_1269KEGG: tdn:Suden_1691 Mg2+ transporter protein, CorA- like. (260 aa)
Sdel_1457PFAM: AMP-dependent synthetase and ligase; KEGG: dps:DP1333 long-chain-fatty-acid--CoA ligase. (629 aa)
Sdel_1831Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (168 aa)
Sdel_1832PFAM: Cytochrome b/b6 domain; KEGG: abu:Abu_2065 ubiquinol cytochrome c oxidoreductase, cytochrome b subunit. (418 aa)
Sdel_1833KEGG: cco:CCC13826_1919 cytochrome c subfamily protein. (288 aa)
Sdel_1861PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS1843 hydrogenase-3 small subunit. (212 aa)
Sdel_1862PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: wsu:WS1842 hydrogenase 4 membrane subunit. (646 aa)
Sdel_1863PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: wsu:WS1841 hydrogenase-4 component C. (308 aa)
Sdel_1864PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: wsu:WS1840 hydrogenase 4 membrane subunit. (215 aa)
Sdel_1865PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: wsu:WS1839 hydrogenase 4 membrane subunit. (489 aa)
Sdel_1866PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: wsu:WS1838 hydrogenase 4 subunit. (579 aa)
Sdel_1867PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS1837 formate hydrogenlyase complex iron- sulfur subunit. (179 aa)
Sdel_1868PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: wsu:WS1836 hydrogenase-Ni,Fe-hydrogenase III small subunit. (274 aa)
Sdel_1869KEGG: wsu:WS1835 hypothetical protein. (115 aa)
Sdel_1870TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: wsu:WS1834 hypothetical protein. (148 aa)
Sdel_2084TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: wsu:WS0124 flavocytochrome c flavin subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (520 aa)
Sdel_2085KEGG: cco:CCC13826_1830 flavocytochrome c heme subunit. (146 aa)
Sdel_2086PFAM: NapC/NirT cytochrome c domain protein; KEGG: cco:CCC13826_1831 NapC/NirT cytochrome c family, N-region. (210 aa)
Sdel_2087PFAM: outer membrane porin; KEGG: glo:Glov_3627 outer membrane porin. (452 aa)
Sdel_2088PFAM: transcriptional regulator domain protein; KEGG: ccv:CCV52592_0337 putative response regulator ArlR. (220 aa)
Sdel_2089TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: wsu:WS0124 flavocytochrome c flavin subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (519 aa)
Sdel_2090PFAM: transcriptional regulator domain protein; KEGG: ccv:CCV52592_0337 putative response regulator ArlR. (220 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.