STRINGSTRING
Sdel_0016 Sdel_0016 Sdel_0112 Sdel_0112 Sdel_0113 Sdel_0113 Sdel_0157 Sdel_0157 Sdel_0158 Sdel_0158 Sdel_0205 Sdel_0205 Sdel_0206 Sdel_0206 Sdel_0218 Sdel_0218 Sdel_0219 Sdel_0219 Sdel_0220 Sdel_0220 flhB flhB Sdel_0262 Sdel_0262 Sdel_0297 Sdel_0297 Sdel_0298 Sdel_0298 Sdel_0320 Sdel_0320 Sdel_0367 Sdel_0367 Sdel_0368 Sdel_0368 Sdel_0399 Sdel_0399 Sdel_0402 Sdel_0402 Sdel_0409 Sdel_0409 Sdel_0539 Sdel_0539 Sdel_0540 Sdel_0540 Sdel_0631 Sdel_0631 Sdel_0633 Sdel_0633 Sdel_0818 Sdel_0818 Sdel_0819 Sdel_0819 Sdel_0835 Sdel_0835 Sdel_0836 Sdel_0836 fliW fliW Sdel_0879 Sdel_0879 Sdel_0968 Sdel_0968 Sdel_0982 Sdel_0982 Sdel_1022 Sdel_1022 flgH flgH Sdel_1073 Sdel_1073 Sdel_1074 Sdel_1074 fliP fliP Sdel_1139 Sdel_1139 Sdel_1142 Sdel_1142 flgI flgI Sdel_1146 Sdel_1146 Sdel_1147 Sdel_1147 Sdel_1148 Sdel_1148 Sdel_1168 Sdel_1168 Sdel_1169 Sdel_1169 Sdel_1202 Sdel_1202 Sdel_1205 Sdel_1205 Sdel_1217 Sdel_1217 flhA flhA Sdel_1432 Sdel_1432 Sdel_1434 Sdel_1434 Sdel_1455 Sdel_1455 Sdel_1491 Sdel_1491 Sdel_1544 Sdel_1544 Sdel_1545 Sdel_1545 csrA csrA fliE fliE Sdel_1673 Sdel_1673 Sdel_1674 Sdel_1674 Sdel_1763 Sdel_1763 Sdel_1826 Sdel_1826 Sdel_1860 Sdel_1860 Sdel_1925 Sdel_1925 Sdel_1930 Sdel_1930 Sdel_1931 Sdel_1931 Sdel_1980 Sdel_1980 Sdel_1981 Sdel_1981 cheB cheB cheD cheD Sdel_1988 Sdel_1988 Sdel_1989 Sdel_1989 Sdel_1991 Sdel_1991 Sdel_1992 Sdel_1992 Sdel_1993 Sdel_1993 Sdel_2026 Sdel_2026 Sdel_2027 Sdel_2027 Sdel_2028 Sdel_2028 uppP uppP Sdel_2141 Sdel_2141 Sdel_2155 Sdel_2155 Sdel_2207 Sdel_2207 Sdel_2229 Sdel_2229 fliQ fliQ Sdel_2256 Sdel_2256 Sdel_2284 Sdel_2284 Sdel_2288 Sdel_2288 Sdel_2289 Sdel_2289 Sdel_2290 Sdel_2290 Sdel_2291 Sdel_2291
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Sdel_0016PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS0128 putative MCP-type signal transduction protein. (357 aa)
Sdel_0112PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_1331 methyl-accepting chemotaxis sensory transducer. (563 aa)
Sdel_0113PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_1331 methyl-accepting chemotaxis sensory transducer. (563 aa)
Sdel_0157PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: ccv:CCV52592_1961 putative DNA-binding response regulator. (447 aa)
Sdel_0158PAS sensor protein; KEGG: cco:CCC13826_1233 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (170 aa)
Sdel_0205PFAM: CheW domain protein; response regulator receiver; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; response regulator receiver; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: cff:CFF8240_0331 chemotaxis histidine kinase. (774 aa)
Sdel_0206PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: ccv:CCV52592_1658 purine-binding chemotaxis protein CheW. (164 aa)
Sdel_0218Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (574 aa)
Sdel_0219TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: cla:Cla_1357 flagellar motor switch protein FliG. (341 aa)
Sdel_0220PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: cff:CFF8240_0265 flagellar assembly protein H. (263 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (353 aa)
Sdel_0262PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: nam:NAMH_1064 mcp-signal transduction protein. (650 aa)
Sdel_0297TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: ccv:CCV52592_1439 flagellar motor switch protein FliM. (353 aa)
Sdel_0298TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: cco:CCC13826_1019 flagellar motor switch protein FliY. (286 aa)
Sdel_0320PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: ccv:CCV52592_1462 putative alkyl- dihydroxyacetone phosphate synthase. (385 aa)
Sdel_0367PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS1672 MCP domain-containing signal transducer. (483 aa)
Sdel_0368TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; KEGG: cco:CCC13826_1233 methyl-accepting chemotaxis protein. (168 aa)
Sdel_0399PFAM: protein of unknown function UPF0118; KEGG: cju:C8J_1281 hypothetical protein. (346 aa)
Sdel_0402PFAM: Hpt domain protein; KEGG: ccv:CCV52592_1924 Hpt domain-containing protein. (136 aa)
Sdel_0409Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (257 aa)
Sdel_0539KEGG: cco:CCC13826_0976 hypothetical protein. (290 aa)
Sdel_0540PFAM: surface presentation of antigens (SPOA) protein; KEGG: cff:CFF8240_0356 flagellar motor switch protein. (103 aa)
Sdel_0631PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: cco:CCC13826_1039 protease HtpX. (656 aa)
Sdel_0633PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cco:CCC13826_0396 sensor histidine kinase. (340 aa)
Sdel_0818PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS0949 MCP domain-containing signal transducer. (590 aa)
Sdel_0819PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_2035 putative transducer. (627 aa)
Sdel_0835Protein-glutamate O-methyltransferase; KEGG: ccv:CCV52592_1333 CheR methyltransferase SAM binding domain-containing protein; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type. (280 aa)
Sdel_0836PFAM: CheB methylesterase; KEGG: ccv:CCV52592_1332 chemotaxis response regulator protein-glutamate methylesterase. (189 aa)
fliWProtein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (130 aa)
Sdel_0879Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (179 aa)
Sdel_0968Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (801 aa)
Sdel_0982PFAM: domain of unknown function DUF1745; FIST C domain; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: mmw:Mmwyl1_2918 methyl-accepting chemotaxis sensory transducer. (666 aa)
Sdel_1022RNA polymerase sigma-54 factor, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (423 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (237 aa)
Sdel_1073PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_2035 putative transducer. (633 aa)
Sdel_1074KEGG: tcx:Tcr_1007 hypothetical protein. (203 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (238 aa)
Sdel_1139TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: cff:CFF8240_0100 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (614 aa)
Sdel_1142KEGG: cff:CFF8240_0097 hypothetical protein. (98 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (350 aa)
Sdel_1146PFAM: flagellar protein FlaG protein; KEGG: cff:CFF8240_0093 flagellar protein FlaG. (118 aa)
Sdel_1147Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (554 aa)
Sdel_1148TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: hhe:HH0791 flagellar protein FliS. (125 aa)
Sdel_1168PFAM: MotA/TolQ/ExbB proton channel; KEGG: hpb:HELPY_0542 chemotaxis protein MotA (motility protein A); putative membrane protein. (258 aa)
Sdel_1169PFAM: OmpA/MotB domain protein; KEGG: hpg:HPG27_772 flagellar motor protein MotB. (266 aa)
Sdel_1202PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS0929 methyl-accepting chemotaxis protein. (380 aa)
Sdel_1205PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pca:Pcar_0439 methyl-accepting chemotaxis protein (MCP). (713 aa)
Sdel_1217PFAM: OmpA/MotB domain protein; KEGG: ccv:CCV52592_0111 putative chemotaxis protein MotB. (385 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (730 aa)
Sdel_1432PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: wsu:WS1923 putative methyl-accepting chemotaxis protein. (546 aa)
Sdel_1434PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: cff:CFF8240_0562 putative methyl-accepting chemotaxis protein. (530 aa)
Sdel_1455PFAM: protein of unknown function DUF1078 domain protein; KEGG: wsu:WS1332 hypothetical protein. (93 aa)
Sdel_1491PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS1520 methyl-accepting chemotaxis protein. (393 aa)
Sdel_1544TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: wsu:WS1802 flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (262 aa)
Sdel_1545TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; KEGG: cco:CCC13826_2185 flagellar basal-body rod protein. (267 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (75 aa)
fliETIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: ccv:CCV52592_0691 flagellar hook-basal body protein FliE. (98 aa)
Sdel_1673TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: cla:Cla_1066 flagellar proximal rod protein FlgC; Belongs to the flagella basal body rod proteins family. (163 aa)
Sdel_1674Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (144 aa)
Sdel_1763PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cjd:JJD26997_0603 chemotaxis protein CheY. (121 aa)
Sdel_1826PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: nam:NAMH_1064 mcp-signal transduction protein. (650 aa)
Sdel_1860PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: ccv:CCV52592_1331 methyl-accepting chemotaxis sensory transducer. (533 aa)
Sdel_1925KEGG: wsu:WS2054 hypothetical protein. (175 aa)
Sdel_1930PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_2035 putative transducer. (625 aa)
Sdel_1931PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_2035 putative transducer. (621 aa)
Sdel_1980PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: abu:Abu_1358 response regulator receiver domain-containing protein. (126 aa)
Sdel_1981KEGG: dps:DP1553 hypothetical protein. (198 aa)
cheBProtein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (341 aa)
cheDCheD family protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (156 aa)
Sdel_1988Protein-glutamate O-methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (275 aa)
Sdel_1989PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; KEGG: tdn:Suden_0974 CheA signal transduction histidine kinases. (678 aa)
Sdel_1991PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS0094 methyl-accepting chemotaxis protein II. (661 aa)
Sdel_1992PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: tdn:Suden_0971 CheW protein. (169 aa)
Sdel_1993PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: wsu:WS1077 putative two-component response regulator. (128 aa)
Sdel_2026PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: tdn:Suden_0283 methyl-accepting chemotaxis sensory transducer. (440 aa)
Sdel_2027PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: abu:Abu_0418 two-component response regulator. (122 aa)
Sdel_2028PAS sensor protein; KEGG: abu:Abu_0420 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein. (569 aa)
uppPUndecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (255 aa)
Sdel_2141PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_1331 methyl-accepting chemotaxis sensory transducer. (708 aa)
Sdel_2155Flagellar protein export ATPase FliI; KEGG: ccv:CCV52592_1495 flagellum-specific ATP synthase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase. (434 aa)
Sdel_2207PFAM: flagellin domain protein; KEGG: cla:Cla_0567 flagellin. (239 aa)
Sdel_2229Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (481 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (88 aa)
Sdel_2256PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS0859 putative chemotaxis chemoreceptor MCPG. (548 aa)
Sdel_2284Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (150 aa)
Sdel_2288KEGG: cff:CFF8240_0010 hypothetical protein. (504 aa)
Sdel_2289Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (229 aa)
Sdel_2290TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: ccv:CCV52592_2049 hypothetical protein. (567 aa)
Sdel_2291TIGRFAM: flagellar hook protein FlgE; fagellar hook- basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ccv:CCV52592_2040 flagellar hook protein FlgE. (851 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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