STRINGSTRING
Sdel_0448 Sdel_0448 Sdel_0449 Sdel_0449 Sdel_0736 Sdel_0736 Sdel_0743 Sdel_0743 Sdel_0744 Sdel_0744 Sdel_1179 Sdel_1179 Sdel_1180 Sdel_1180 Sdel_1442 Sdel_1442 Sdel_1443 Sdel_1443 Sdel_1876 Sdel_1876 Sdel_1983 Sdel_1983 Sdel_1984 Sdel_1984 Sdel_1987 Sdel_1987 Sdel_1990 Sdel_1990 Sdel_2138 Sdel_2138 Sdel_2139 Sdel_2139
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0448PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: abu:Abu_0363 two-component response regulator. (224 aa)
Sdel_0449PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: abu:Abu_0362 two-component sensor histidine kinase. (532 aa)
Sdel_0736PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cff:CFF8240_0140 two component transcriptional regulator. (236 aa)
Sdel_0743PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: wsu:WS0657 two component response regulator. (218 aa)
Sdel_0744PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: wsu:WS0658 two component sensor kinase. (616 aa)
Sdel_1179PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: wsu:WS0658 two component sensor kinase. (740 aa)
Sdel_1180PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: wsu:WS0657 two component response regulator. (214 aa)
Sdel_1442PAS sensor protein; KEGG: ccv:CCV52592_0849 putative two component sensor kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein. (669 aa)
Sdel_1443PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cff:CFF8240_0140 two component transcriptional regulator. (228 aa)
Sdel_1876PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: nam:NAMH_1300 histidine kinase. (572 aa)
Sdel_1983PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: wsu:WS1376 CheY and CheB genes (chemotaxis protein). (428 aa)
Sdel_1984PAS sensor protein; KEGG: tcx:Tcr_1924 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (506 aa)
Sdel_1987PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: glo:Glov_1309 histidine kinase. (300 aa)
Sdel_1990KEGG: wsu:WS1079 hypothetical protein. (89 aa)
Sdel_2138PAS sensor protein; KEGG: nam:NAMH_0746 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein. (516 aa)
Sdel_2139PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: abu:Abu_0101 two-component response regulator. (236 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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