STRINGSTRING
Sdel_0234 Sdel_0234 Sdel_0235 Sdel_0235 Sdel_0892 Sdel_0892 Sdel_1579 Sdel_1579 Sdel_1580 Sdel_1580 Sdel_2130 Sdel_2130 Sdel_2131 Sdel_2131
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0234PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cco:CCC13826_0979 prolipoprotein diacylglyceryl transferase. (436 aa)
Sdel_0235PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cff:CFF8240_0242 two-component regulator. (223 aa)
Sdel_0892PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cjr:CJE1664 DNA-binding response regulator. (233 aa)
Sdel_1579PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: nis:NIS_0527 two-component response regulator. (225 aa)
Sdel_1580PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: nis:NIS_0528 two-component sensor histidine kinase. (497 aa)
Sdel_2130PFAM: histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: abu:Abu_1161 two-component sensor histidine kinase. (418 aa)
Sdel_2131PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: abu:Abu_1160 two-component response regulator. (223 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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