STRINGSTRING
Sdel_0241 Sdel_0241 Sdel_0242 Sdel_0242 Sdel_0243 Sdel_0243 infB infB Sdel_0249 Sdel_0249 rimP rimP Sdel_0252 Sdel_0252 Sdel_1709 Sdel_1709
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0241PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: nam:NAMH_1550 MgpA protein. (314 aa)
Sdel_0242PFAM: Peptidase M23; KEGG: cff:CFF8240_1499 peptidase M23B. (456 aa)
Sdel_0243Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization. (199 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (888 aa)
Sdel_0249Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (125 aa)
rimPProtein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. (142 aa)
Sdel_0252PFAM: protein of unknown function DUF81; KEGG: cha:CHAB381_1430 hypothetical protein. (249 aa)
Sdel_1709PFAM: ATP-sulfurylase; KEGG: nis:NIS_0593 sulfate adenylyltransferase. (397 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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